Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000788.1 Hibiscus syriacus cultivar Beakdansim tig00001527_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51612

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
608--918
106
2.9
106
86
0
406
34
24
19
22
1.97
1071--1570
163
3.1
162
89
5
751
28
17
13
41
1.86
1208--1397
99
1.9
100
81
8
235
26
15
14
43
1.85
1316--1453
64
2.2
64
84
2
170
28
18
13
40
1.87
1619--1704
36
2.4
36
82
0
91
29
19
12
38
1.89
1372--1732
101
3.6
99
80
6
345
29
18
12
39
1.88
1687--1745
30
2.0
30
87
12
86
38
16
10
33
1.83
1797--1858
21
3.2
21
63
25
55
20
17
16
45
1.86
1800--1868
36
1.9
36
96
0
129
21
21
14
42
1.89
1886--1971
37
2.5
33
80
14
118
40
17
9
32
1.81
3159--3225
17
3.8
16
72
18
53
25
4
1
68
1.17
3218--3260
19
2.3
18
84
11
59
41
4
0
53
1.21
19931--20017
32
2.7
32
80
0
93
32
14
12
40
1.84
22405--22472
31
2.2
31
86
0
91
25
11
14
48
1.78
23293--23351
31
1.9
31
85
0
82
55
11
13
18
1.68
26459--26502
21
2.1
21
87
4
63
45
2
0
52
1.13
26322--26708
182
2.1
184
93
1
654
45
8
3
42
1.50
28602--28670
30
2.3
29
90
2
102
53
10
10
26
1.66
40137--40237
3
33.7
3
91
0
148
60
0
3
35
1.15
40554--41450
113
8.0
113
94
1
1532
28
18
14
38
1.90
42077--42546
165
2.9
164
91
4
752
37
22
13
27
1.91
42077--42546
82
5.7
83
89
5
715
37
22
13
27
1.91

Tables:   1

The End!