Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007893.1 Hibiscus syriacus cultivar Beakdansim tig00110277_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72142

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2630--2690
1
61.0
1
85
0
68
1
3
4
90
0.61
2619--2691
16
4.5
16
78
11
69
1
5
8
84
0.81
2619--2691
32
2.2
34
85
9
107
1
5
8
84
0.81
5731--5780
1
50.0
1
83
0
64
0
0
8
92
0.40
5724--5781
11
5.5
11
85
8
66
0
1
12
86
0.65
5731--5781
20
2.4
21
93
6
86
0
0
9
90
0.46
5724--5769
22
2.1
22
91
0
74
0
2
10
86
0.64
6097--6136
21
1.9
21
90
10
64
67
5
12
15
1.38
6097--6139
10
4.2
10
80
13
52
69
4
11
13
1.33
6527--6631
50
2.3
43
80
16
108
52
13
1
32
1.51
10304--10332
9
3.0
10
90
10
51
0
0
10
89
0.48
10296--10332
19
1.9
19
88
0
56
2
0
13
83
0.74
10329--10373
10
4.5
10
83
8
56
0
13
8
77
0.98
10304--10373
21
3.8
19
75
15
67
0
8
10
81
0.88
10689--10733
11
4.1
11
85
5
56
71
2
11
15
1.24
12046--12087
17
2.4
18
84
4
59
76
0
19
4
0.96
12276--12330
17
3.4
17
80
7
51
16
16
1
65
1.36
21858--21926
13
5.5
13
72
10
54
27
42
2
27
1.70
25056--25124
13
5.5
13
72
10
63
28
39
2
28
1.71
28389--28454
15
4.4
15
70
24
50
18
25
0
56
1.42
32005--32049
19
2.3
20
88
3
65
37
13
6
42
1.70
32013--32055
20
2.2
19
95
4
77
34
11
4
48
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32395--32460
36
1.9
34
87
9
98
27
42
3
27
1.70
32869--32914
22
2.1
22
84
8
58
82
4
8
4
0.93
32950--32983
6
5.5
6
89
6
50
82
2
11
2
0.89
32950--32983
13
2.8
12
86
8
50
82
2
11
2
0.89
35313--35388
37
2.1
37
100
0
152
25
22
13
39
1.90
35887--35918
15
2.1
16
94
5
57
40
15
18
25
1.90
41606--41655
21
2.4
21
83
9
59
62
0
26
12
1.30
46202--46244
20
2.2
20
91
4
70
39
11
4
44
1.62
46585--46653
13
5.5
13
72
10
54
27
42
2
27
1.70
48627--48656
13
2.4
13
94
5
53
26
30
0
43
1.55
51302--51330
5
6.0
5
92
8
51
0
20
0
79
0.74
51302--51343
19
2.2
19
87
8
59
0
21
2
76
0.90
51341--51386
23
2.1
21
92
8
74
15
10
13
60
1.58
52172--52295
65
1.9
65
93
0
212
30
23
25
20
1.99
52601--52650
21
2.4
21
84
15
61
60
0
28
12
1.32
55530--56360
413
2.0
413
99
0
1644
29
23
16
30
1.96
58275--58324
21
2.4
21
83
9
59
62
0
26
12
1.30
65776--65839
27
2.3
27
86
2
83
10
14
10
64
1.51
65946--65994
26
2.0
26
92
8
84
18
22
22
36
1.95

Tables:   1

The End!