Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000079.1 Hibiscus syriacus cultivar Beakdansim tig00000143_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36690

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7231--7289
21
2.8
21
78
16
68
25
0
30
44
1.55
7230--7289
14
4.3
14
75
12
52
25
0
31
43
1.55
7455--7517
11
5.9
11
73
14
60
38
0
3
58
1.14
7451--7488
20
1.9
20
89
10
60
42
0
0
57
0.98
8776--8801
12
2.2
12
100
0
52
19
23
38
19
1.93
8838--8893
28
2.0
29
96
3
105
26
28
8
35
1.87
8841--8908
28
2.4
28
87
7
93
26
27
7
38
1.83
19789--19828
20
2.0
20
100
0
80
30
20
15
35
1.93
24060--24122
30
2.1
30
90
0
99
34
9
11
44
1.73
24060--24144
30
2.8
29
82
8
80
34
10
9
45
1.71
24552--24955
94
4.5
93
84
9
539
36
8
16
39
1.78
24661--24791
26
4.9
27
72
11
108
37
9
16
36
1.82
24646--24816
81
2.1
80
94
1
297
38
8
15
38
1.78
24551--24909
175
2.1
173
90
2
558
37
8
15
38
1.78
24863--25047
64
2.9
62
77
8
194
36
7
15
40
1.75

Tables:   1

The End!