Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007901.1 Hibiscus syriacus cultivar Beakdansim tig00110292_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70604

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--55
13
3.5
13
93
0
74
19
21
43
15
1.87
2814--2953
58
2.4
58
81
8
160
32
22
2
42
1.68
3119--3256
59
2.3
60
75
10
149
39
6
18
35
1.77
17126--17180
2
27.5
2
100
0
110
49
0
0
50
1.00
22207--22240
18
1.9
18
88
5
52
38
17
5
38
1.74
27077--27126
20
2.5
20
80
0
64
60
4
18
18
1.52
35693--35741
20
2.5
20
82
0
62
59
4
18
18
1.53
36053--36094
18
2.3
19
87
4
59
71
4
2
21
1.16
41373--41418
22
2.0
23
84
12
60
47
0
0
52
1.00
41586--41666
19
4.3
19
72
20
64
48
1
1
49
1.17
41729--41823
23
4.1
21
75
18
75
52
1
2
44
1.19
54901--55024
58
2.1
60
80
8
139
41
7
16
33
1.76
60725--60881
3
53.7
3
86
7
225
62
0
3
34
1.11
61200--61825
113
5.6
113
95
3
1106
28
18
14
38
1.90
61200--61825
332
1.9
339
93
3
1106
28
18
14
38
1.90
62413--62798
82
4.7
82
92
2
603
35
21
13
29
1.92
63532--63579
18
2.8
18
90
6
73
58
6
6
29
1.47
63908--63939
16
2.0
16
93
0
55
0
15
0
84
0.63
63909--63943
10
3.3
10
92
8
52
0
11
0
88
0.51

Tables:   1

The End!