Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007919.1 Hibiscus syriacus cultivar Beakdansim tig00110322_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60707

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8301--8357
2
28.5
2
89
7
89
45
1
1
50
1.22
12494--12548
23
2.4
23
96
0
101
36
16
14
32
1.89
13259--13443
28
6.6
27
75
14
114
46
17
2
34
1.60
13290--13438
28
5.4
28
76
15
134
48
15
2
33
1.56
20489--20641
29
5.3
28
76
6
126
46
16
1
34
1.59
20515--20639
28
4.3
28
78
10
119
49
15
0
34
1.50
21634--21680
2
23.5
2
100
0
94
51
0
0
48
1.00
23727--23796
32
2.4
31
79
11
76
45
0
0
54
0.99
29326--29351
6
4.3
6
100
0
52
50
0
34
15
1.45
35258--35291
8
4.2
8
84
0
50
38
5
0
55
1.24
35557--35714
55
2.9
54
83
6
178
24
24
20
31
1.98
35621--36210
55
10.7
55
87
2
769
27
26
15
31
1.96
37214--37265
8
6.5
8
88
6
70
9
9
0
80
0.90
37210--37280
18
4.3
16
73
22
58
9
14
0
76
1.03
40776--40803
8
3.5
8
100
0
56
50
10
0
39
1.37
47254--47291
16
2.3
16
95
4
67
36
28
7
26
1.84
50704--50737
8
4.2
8
84
0
50
38
5
0
55
1.24
56172--56227
28
2.0
28
92
0
94
37
35
7
19
1.79
56534--56570
20
1.9
20
88
5
58
29
13
2
54
1.53

Tables:   1

The End!