Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000794.1 Hibiscus syriacus cultivar Beakdansim tig00001537_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52102

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67--137
22
2.9
25
72
18
69
42
4
0
53
1.20
82--184
27
3.9
28
73
18
85
38
3
0
57
1.17
90--153
24
2.5
25
80
14
78
40
3
0
56
1.15
918--954
17
2.2
17
86
13
51
54
0
8
37
1.30
974--1003
15
2.0
15
93
0
51
30
0
0
70
0.88
11394--11726
182
1.8
182
88
3
519
33
23
14
29
1.94
16900--16956
28
2.0
29
82
3
71
29
3
24
42
1.71
18859--18888
15
2.0
15
100
0
60
40
26
0
33
1.57
19684--19970
102
2.8
102
86
0
367
44
22
17
15
1.86
30257--30305
21
2.4
20
79
3
53
40
18
14
26
1.89
36661--36796
60
2.3
60
82
0
164
30
19
5
44
1.72
41773--41893
51
2.4
49
79
2
134
43
9
16
29
1.80
41784--41893
49
2.2
51
80
6
127
44
9
18
28
1.80
48591--48631
2
20.5
2
100
0
82
48
0
0
51
1.00
50073--50107
2
17.5
2
100
0
70
51
0
0
48
1.00

Tables:   1

The End!