Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007944.1 Hibiscus syriacus cultivar Beakdansim tig00110366_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85748

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
697--741
17
2.5
17
89
7
63
42
0
2
55
1.12
2027--2085
15
4.1
14
79
16
59
25
5
1
67
1.20
2022--2084
13
4.9
13
78
14
69
25
4
1
68
1.18
2021--2084
26
2.5
27
82
14
82
25
4
1
68
1.17
13336--13892
105
5.3
105
97
0
1033
33
25
18
21
1.96
14360--14407
22
2.2
22
88
7
71
41
0
2
56
1.11
15671--15736
11
5.5
11
75
20
53
25
4
1
68
1.18
15676--15737
13
4.8
13
74
18
58
25
4
1
67
1.19
15675--15754
26
3.2
24
78
16
65
26
5
3
65
1.30
15828--15857
14
2.1
14
93
0
51
23
10
0
66
1.21
17672--18101
223
2.0
211
88
7
630
45
8
7
38
1.63
18166--18214
19
2.5
19
78
15
64
51
10
16
22
1.74
18329--18375
20
2.4
19
79
10
58
55
8
17
19
1.67
22479--22541
19
3.4
19
95
2
110
31
3
9
55
1.48
22621--23638
199
5.1
198
95
1
1753
36
14
15
33
1.88
25087--25148
18
3.4
18
88
0
88
38
6
33
20
1.79
25087--25148
6
10.3
6
83
0
61
38
6
33
20
1.79
25102--25152
3
17.0
3
83
0
66
37
3
33
25
1.74
25090--25152
12
5.2
12
90
0
81
36
6
33
23
1.80
26515--27183
184
3.7
184
97
1
1272
34
14
15
34
1.89
29730--29792
23
2.7
23
90
0
90
36
6
19
38
1.77
29730--29802
23
3.2
23
86
3
85
35
5
19
39
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30159--30221
23
2.7
23
90
0
90
36
6
19
38
1.77
30159--30231
23
3.2
23
86
3
85
35
5
19
39
1.75
30589--30651
23
2.7
23
90
0
90
36
6
19
38
1.77
30589--30661
23
3.2
23
86
3
85
35
5
19
39
1.75
29632--30928
429
3.0
430
98
0
2541
39
8
13
39
1.74
40751--40810
31
2.0
31
86
3
86
48
5
16
30
1.67
83556--83615
31
1.9
31
82
0
75
40
0
10
50
1.36
83623--83666
2
22.0
2
100
0
88
50
0
0
50
1.00
83923--83990
26
2.6
27
88
11
106
38
0
0
61
0.96
83934--83981
16
2.9
16
75
9
51
33
0
0
66
0.92

Tables:   1

The End!