Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007958.1 Hibiscus syriacus cultivar Beakdansim tig00110385_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62617

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3546--3664
41
2.9
42
81
7
152
22
20
22
34
1.97
3809--3930
41
3.0
41
83
4
131
28
22
20
27
1.99
4577--4852
119
2.3
118
83
4
349
42
14
18
25
1.87
5008--5063
3
19.0
3
81
3
69
41
0
0
58
0.98
10322--10366
23
2.0
23
86
0
63
33
6
26
33
1.83
11791--11855
17
4.1
17
73
15
66
47
4
0
47
1.22
11911--11973
2
31.5
2
100
0
126
50
0
0
49
1.00
12568--12635
35
1.9
35
90
0
109
30
0
25
44
1.54
35115--35385
131
2.1
132
97
0
517
24
16
19
39
1.92
45766--45810
14
3.0
15
80
9
56
68
8
4
17
1.32
47184--47266
3
27.7
3
85
4
114
62
1
2
33
1.16
47592--48497
113
8.0
113
87
3
1257
29
19
13
37
1.90
47593--48489
226
4.0
226
94
1
1449
29
19
13
37
1.90
49282--49649
83
4.4
83
91
2
605
36
20
13
29
1.91
50387--50434
19
2.7
18
87
9
64
56
8
6
29
1.53
50766--50831
25
2.6
25
85
7
80
1
15
0
83
0.72
50764--50816
12
4.4
12
82
15
65
0
13
0
86
0.56
50764--50815
1
52.0
1
76
0
50
0
11
0
88
0.52
61386--61434
16
3.2
16
75
16
50
65
0
4
30
1.11

Tables:   1

The End!