Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007966.1 Hibiscus syriacus cultivar Beakdansim tig00110396_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85816

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3852--3934
43
2.0
42
84
13
111
43
7
18
31
1.77
5136--5204
30
2.3
30
90
5
104
39
4
24
31
1.75
5423--5466
23
1.9
23
95
0
79
18
27
27
27
1.98
5422--5477
23
2.5
22
85
8
76
17
26
25
30
1.97
6239--6330
23
4.0
23
87
2
123
31
25
26
17
1.97
6384--6463
21
3.8
21
76
12
76
40
21
15
23
1.91
8514--8560
13
3.4
14
77
14
53
42
17
0
40
1.49
9842--9918
31
2.5
31
91
0
118
19
10
16
53
1.72
33691--33739
25
2.0
25
91
0
80
32
36
16
14
1.89
34622--34686
23
2.8
23
90
4
96
33
24
23
18
1.96
35077--35132
2
28.5
2
96
3
105
48
0
0
51
1.00
35804--35841
17
2.2
17
100
0
76
44
23
5
26
1.74
72704--72747
19
2.4
19
96
3
81
38
4
25
31
1.76
75460--75876
55
7.8
55
78
7
353
32
14
23
29
1.94
75582--75825
52
4.7
51
76
11
165
32
14
25
28
1.94
79086--79368
145
2.0
142
85
7
385
42
7
9
41
1.64
79810--79915
6
18.0
6
93
3
108
6
2
59
31
1.37
80080--80143
24
2.7
22
76
13
56
40
1
1
56
1.18
84697--84729
15
2.2
15
100
0
66
48
6
0
45
1.27
85761--85796
4
9.0
4
93
0
63
27
0
22
50
1.50

Tables:   1

The End!