Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007982.1 Hibiscus syriacus cultivar Beakdansim tig00110423_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74398

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1401--1443
19
2.3
19
100
0
86
20
39
9
30
1.84
5852--5911
20
3.0
20
77
0
66
30
23
21
25
1.99
11039--11117
29
2.7
29
80
13
81
25
11
1
62
1.37
23334--23382
23
2.2
22
82
7
55
24
26
24
24
2.00
36200--36586
198
2.0
197
86
1
551
31
26
16
26
1.96
47724--47802
29
2.7
29
80
13
81
24
11
2
62
1.41
56305--56508
86
2.4
86
86
3
295
38
14
20
25
1.91
59165--59208
18
2.6
16
82
13
52
65
6
0
27
1.17
59936--59983
23
2.2
22
85
7
62
70
0
8
20
1.12
61985--62125
66
2.2
66
89
1
212
43
9
19
27
1.82
62090--62339
36
7.2
36
70
13
184
44
9
18
27
1.80
62037--62338
136
2.2
137
88
2
457
45
9
17
27
1.80
62264--62356
36
2.6
36
85
0
105
44
10
15
30
1.80
63665--63841
95
1.9
96
91
3
295
30
19
18
31
1.96
68077--68169
3
31.0
3
74
20
63
65
1
4
29
1.18
74361--74397
19
1.9
19
88
0
56
35
24
18
21
1.96

Tables:   1

The End!