Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007991.1 Hibiscus syriacus cultivar Beakdansim tig00110440_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76536

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
703--753
22
2.3
23
93
3
86
29
3
35
31
1.76
9810--9870
26
2.3
27
81
10
74
6
14
4
73
1.20
19933--20001
33
2.1
33
83
5
86
31
1
36
30
1.67
19972--20084
36
3.2
36
89
1
165
28
3
35
32
1.74
19986--20084
13
8.3
11
69
23
58
30
3
35
31
1.73
24350--24418
33
2.1
33
83
5
86
31
1
36
30
1.67
24404--24500
13
8.0
12
72
22
62
28
3
37
30
1.73
24389--24501
36
3.2
36
92
1
174
27
3
36
32
1.74
29280--29331
24
2.2
24
82
0
59
28
23
19
28
1.98
37451--37535
11
7.2
11
72
22
66
31
36
3
28
1.74
37448--37552
36
2.9
36
95
1
185
30
36
4
28
1.78
50283--50334
17
2.9
18
81
18
65
73
5
19
1
1.14
50290--50361
11
6.5
11
75
12
58
75
2
20
1
1.01
50285--50358
5
15.8
5
71
18
61
75
2
20
1
1.00
50285--50351
8
7.9
8
74
22
57
74
2
20
1
1.03
50285--50350
16
3.8
17
79
16
66
74
3
21
1
1.04
50285--50358
13
5.3
15
70
16
61
75
2
20
1
1.00
50326--50358
16
2.1
16
94
5
59
78
0
21
0
0.75
58551--58614
19
3.3
20
85
10
73
3
18
3
75
1.08

Tables:   1

The End!