Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000802.1 Hibiscus syriacus cultivar Beakdansim tig00001557_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85488

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3651--3742
23
4.0
23
88
0
121
26
25
27
21
2.00
4396--4483
19
4.6
19
95
0
158
22
29
17
30
1.96
10647--10715
23
3.0
23
83
8
95
27
26
26
20
1.99
11371--11434
27
2.4
27
97
0
119
21
26
20
31
1.98
14100--14141
21
2.0
21
86
9
59
33
16
9
40
1.81
15541--15640
44
2.3
44
98
0
191
39
14
19
28
1.90
16887--16982
31
3.1
30
84
4
111
25
16
23
34
1.95
18866--18929
32
2.1
32
91
5
105
26
23
10
39
1.88
23366--23498
66
2.0
66
83
2
169
24
19
30
25
1.98
26723--26765
3
14.7
3
81
13
54
32
0
2
65
1.06
26723--26765
16
2.8
15
80
13
52
32
0
2
65
1.06
26723--26765
19
2.3
19
92
8
70
32
0
2
65
1.06
33581--33905
160
2.0
160
100
0
650
29
15
20
35
1.93
38430--38464
17
2.1
17
100
0
70
40
20
22
17
1.92
40440--40499
23
2.5
25
83
8
79
45
1
15
38
1.56
45806--45873
34
2.0
34
83
13
86
48
19
10
22
1.78
58500--58552
24
2.2
24
83
3
72
49
1
13
35
1.53
58745--58779
2
17.5
2
100
0
70
51
0
0
48
1.00
59681--59723
21
2.0
21
82
8
52
6
55
11
25
1.60
64838--64868
12
2.6
12
94
0
53
29
19
0
51
1.47
64903--64948
19
2.4
20
82
10
60
28
15
6
50
1.69
64921--64987
19
3.5
19
77
4
64
26
19
7
46
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64932--64995
19
3.4
19
80
0
74
31
18
6
43
1.75
68331--68384
6
8.2
6
77
18
54
77
5
1
14
1.03
70265--70319
25
2.2
24
81
9
67
49
12
3
34
1.59
72565--72694
42
3.1
41
73
9
111
30
21
21
26
1.98
72889--72952
20
3.1
20
75
11
67
29
25
23
21
1.99
72841--72954
42
2.7
41
81
6
131
28
23
21
26
1.99
72519--73294
261
3.0
260
90
2
1209
33
18
17
30
1.94
75194--75300
15
7.1
14
73
24
85
2
18
0
78
0.87
75193--75302
8
13.2
8
73
13
80
2
20
0
77
0.89
75194--75300
16
7.0
15
76
15
94
2
18
0
78
0.87
75195--75282
29
3.0
29
86
6
106
1
20
0
78
0.82
75169--75322
44
3.6
41
77
16
127
3
21
0
74
0.97
75234--75304
21
3.6
21
80
10
62
5
18
0
76
0.98
75169--75299
69
1.9
69
81
9
160
2
21
0
76
0.90
75194--75300
31
3.5
30
77
16
87
2
18
0
78
0.87
79265--79382
51
2.3
50
84
8
150
60
9
11
19
1.57
80069--80127
30
2.0
30
96
0
109
30
11
6
50
1.65

Tables:   1

The End!