Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008021.1 Hibiscus syriacus cultivar Beakdansim tig00110490_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84612

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3284--3366
21
3.8
22
78
7
80
21
34
24
19
1.96
3282--3344
21
2.9
21
83
4
81
20
33
25
20
1.97
9814--9864
24
2.2
24
85
3
68
11
19
15
52
1.73
20078--20155
18
4.6
18
66
18
58
75
5
14
5
1.14
24067--24130
32
2.0
32
100
0
128
21
15
15
46
1.83
25328--25457
61
2.1
61
95
0
233
26
13
3
57
1.50
25876--25920
21
2.2
21
84
11
58
22
15
13
48
1.79
31868--31945
38
2.1
38
95
0
138
28
26
11
33
1.91
38387--38420
17
2.1
16
88
5
50
64
11
14
8
1.49
40578--40624
24
2.0
24
87
4
69
55
17
17
10
1.69
47033--47072
21
1.9
21
89
0
62
25
40
25
10
1.86
49356--49381
13
2.0
13
100
0
52
30
7
0
61
1.24
55619--55658
21
1.9
21
94
0
71
57
0
25
17
1.40
55755--55783
11
2.6
11
100
0
58
37
0
27
34
1.57
55808--55919
35
3.2
35
83
2
136
31
4
35
28
1.77
61464--61574
35
3.2
35
83
2
134
32
2
36
28
1.72
63271--63301
2
15.5
2
100
0
62
51
0
0
48
1.00
63998--64128
45
2.8
46
83
4
140
34
22
26
16
1.95
64019--64128
45
2.4
46
86
3
143
34
23
25
16
1.95
77567--77614
23
2.1
23
100
0
96
45
0
22
31
1.53
82016--82078
20
3.2
20
93
2
101
36
11
4
47
1.60
82825--82866
18
2.3
19
84
12
52
83
0
14
2
0.75

Tables:   1

The End!