Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008034.1 Hibiscus syriacus cultivar Beakdansim tig00110519_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88732

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2485--2526
22
2.0
21
85
4
57
28
2
33
35
1.70
6526--6565
21
1.9
21
85
10
55
62
0
17
20
1.33
25659--25720
11
5.6
11
75
17
58
77
3
17
1
0.98
25652--25717
5
12.6
5
74
25
57
78
3
16
1
0.95
25873--25966
41
2.3
41
98
0
179
19
25
4
51
1.65
30617--30643
8
3.4
8
100
0
54
37
11
0
51
1.37
31193--31221
12
2.4
12
100
0
58
41
41
10
6
1.66
32796--32880
11
7.2
11
72
22
66
31
36
3
28
1.74
32793--32897
36
2.9
36
95
1
185
30
36
4
28
1.78
33507--33558
15
3.4
15
75
15
52
15
17
0
67
1.24
36661--36745
11
7.2
11
72
22
66
31
36
3
28
1.74
36658--36762
36
2.9
36
95
1
185
30
36
4
28
1.78
37595--37662
35
1.9
36
87
3
102
29
35
4
30
1.77
42790--42894
36
2.9
36
94
1
176
29
4
35
30
1.78
43232--43282
19
2.6
20
87
3
68
45
5
15
33
1.71
45193--45260
35
1.9
36
93
3
120
30
36
2
29
1.72
49911--49957
19
2.6
18
83
12
60
65
0
14
19
1.26
55182--55240
13
4.7
12
75
22
50
3
16
1
77
0.98
55169--55240
33
2.2
32
83
13
94
5
15
2
76
1.09
55214--55246
10
3.3
10
91
8
50
0
18
0
81
0.68
55508--55554
19
2.6
18
83
12
60
63
2
14
19
1.40
62589--62618
15
2.1
15
93
6
53
0
20
3
76
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76641--76676
15
2.4
15
90
0
54
44
0
5
50
1.25
80911--80946
15
2.4
15
90
0
54
44
0
5
50
1.25

Tables:   1

The End!