Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008069.1 Hibiscus syriacus cultivar Beakdansim tig00110567_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64589

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1780--1822
20
2.2
20
87
4
61
51
9
9
30
1.65
4856--4885
13
2.2
14
94
5
53
0
16
0
83
0.65
10689--10739
19
2.6
20
90
3
77
43
5
15
35
1.71
14867--14917
19
2.6
20
90
3
77
43
5
15
35
1.71
22204--22264
32
1.9
33
84
15
85
57
0
26
16
1.39
22845--22887
19
2.2
20
87
4
61
48
6
9
34
1.62
28724--28778
11
4.9
11
76
10
58
34
1
34
29
1.68
49726--49765
15
2.7
15
81
14
55
17
25
0
57
1.40
59292--59351
24
2.6
23
81
7
77
8
18
10
63
1.50
59299--59351
23
2.2
24
90
3
81
9
16
11
62
1.54
63507--63563
22
2.5
22
75
13
62
8
19
10
61
1.54

Tables:   1

The End!