Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008083.1 Hibiscus syriacus cultivar Beakdansim tig00110586_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73570

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15398--15437
14
2.9
14
88
7
55
5
25
2
67
1.23
23629--23689
24
2.5
24
89
0
104
49
11
14
24
1.77
29040--29098
25
2.4
25
97
0
109
18
28
20
32
1.96
44598--44632
14
2.4
15
90
4
54
34
5
2
57
1.37
44952--45125
57
3.0
58
76
10
158
45
8
12
34
1.71
46062--46141
40
2.0
40
97
0
151
40
11
12
36
1.79
48428--48540
39
2.9
39
86
2
147
32
15
27
24
1.95
55217--55249
15
2.2
15
100
0
66
45
12
6
36
1.66
64397--64430
3
11.3
3
93
0
59
0
29
0
70
0.87
65394--65468
32
2.4
31
86
10
109
32
32
24
12
1.91
66533--66590
27
2.1
27
81
6
64
25
10
15
48
1.77
68564--68636
24
3.0
24
79
0
65
47
15
9
27
1.76
70700--70746
24
2.0
24
83
8
60
55
6
14
23
1.63
71496--71553
27
2.1
27
87
6
82
22
10
18
48
1.78

Tables:   1

The End!