Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008108.1 Hibiscus syriacus cultivar Beakdansim tig00110644_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71186

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1619--1654
13
2.8
14
84
16
51
55
2
11
30
1.49
2339--2377
20
1.9
20
89
5
60
43
5
20
30
1.73
7220--7262
16
2.7
16
96
0
77
37
0
16
46
1.47
13568--13637
18
3.8
18
75
14
70
30
21
25
22
1.99
15756--15789
2
17.0
2
100
0
68
50
0
0
50
1.00
25225--25279
28
2.0
28
100
0
110
40
14
1
43
1.56
43099--43136
16
2.4
16
90
0
58
28
21
0
50
1.49
43356--43391
14
2.6
14
90
0
54
25
13
2
58
1.49
43435--43487
18
3.0
17
77
22
56
26
11
3
58
1.49
48322--48710
98
3.9
96
77
12
351
30
16
12
40
1.85
49120--49457
138
2.4
139
91
2
554
37
16
21
24
1.94
51312--51347
14
2.6
14
90
0
54
25
13
2
58
1.49
51391--51443
18
3.0
16
78
13
52
24
9
5
60
1.49
57404--57775
108
3.4
108
86
2
480
34
18
18
29
1.94
57404--57784
162
2.4
162
83
1
460
34
18
18
29
1.95
57404--57784
54
7.1
54
82
3
417
34
18
18
29
1.95
60959--61037
32
2.5
31
87
4
115
41
15
8
34
1.78
62739--62797
10
5.7
10
73
15
57
10
11
20
57
1.63
62745--62801
16
3.7
16
88
4
82
10
10
19
59
1.59

Tables:   1

The End!