Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000811.1 Hibiscus syriacus cultivar Beakdansim tig00001571_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47508

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3544--3582
18
2.2
18
85
0
51
51
5
2
41
1.38
4166--4235
23
3.0
23
82
0
77
30
25
20
24
1.99
12168--12202
18
1.9
18
88
0
52
45
31
20
2
1.65
23560--23637
29
2.6
29
70
11
68
61
5
1
32
1.26
23793--23829
17
2.2
17
100
0
74
10
29
5
54
1.57
26301--26351
20
2.5
19
81
9
57
31
15
29
23
1.95
29513--29552
21
2.0
20
90
5
62
27
10
35
27
1.89
30797--30864
32
2.1
32
88
0
100
41
14
14
29
1.86
33722--33748
5
5.4
5
100
0
54
44
18
18
18
1.87
42895--42936
15
2.6
16
85
7
50
30
2
4
61
1.29
44942--44968
14
1.9
14
100
0
54
51
11
7
29
1.64
45190--45269
41
2.0
41
94
0
142
45
15
8
31
1.76

Tables:   1

The End!