Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000812.1 Hibiscus syriacus cultivar Beakdansim tig00001572_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70380

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9336--9374
20
2.0
20
84
0
51
35
5
17
41
1.72
9320--9428
54
2.0
54
94
0
191
29
4
16
49
1.65
9390--9429
20
2.0
20
95
0
71
37
5
17
40
1.72
9326--9440
54
2.1
53
88
4
176
28
5
17
48
1.68
15806--15850
23
2.0
22
87
12
65
57
0
0
42
0.98
17493--17517
13
1.9
13
100
0
50
48
20
0
32
1.50
18275--18378
29
3.6
29
85
7
115
44
22
9
24
1.82
18401--18434
17
2.0
17
94
0
59
11
20
47
20
1.81
22677--22735
27
2.1
27
84
12
75
61
5
0
33
1.18
24968--25031
26
2.5
25
80
9
76
42
1
4
51
1.32
24997--25031
18
1.9
18
88
0
52
37
2
5
54
1.39
35719--35884
90
1.9
89
94
1
296
37
11
7
43
1.69
45901--45942
21
2.0
21
95
0
75
35
2
9
52
1.47
49234--49271
15
2.4
16
82
8
51
28
2
7
60
1.38
49621--49650
15
1.9
16
93
6
53
40
10
6
43
1.64
49855--49889
15
2.3
15
90
0
52
51
5
8
34
1.56
49863--49907
15
3.1
15
93
3
74
48
6
6
37
1.56
51324--51364
2
20.5
2
100
0
82
48
0
0
51
1.00
53923--53974
15
3.3
15
75
19
61
55
1
0
42
1.10
54831--54872
15
2.8
15
89
7
59
26
2
0
71
0.98
55869--55910
22
1.9
22
85
9
59
21
0
4
73
1.01
57049--57090
18
2.3
18
100
0
84
35
21
0
42
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57109--57158
20
2.5
20
83
0
55
34
10
18
38
1.84
59346--59388
2
21.5
2
100
0
86
51
0
0
48
1.00
61073--61165
38
2.4
38
87
5
134
24
10
15
49
1.76
65953--65991
19
2.0
19
90
5
60
33
12
10
43
1.77

Tables:   1

The End!