Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008126.1 Hibiscus syriacus cultivar Beakdansim tig00110681_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59641

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
365--402
20
1.9
20
94
0
67
13
2
10
73
1.19
1454--1504
25
2.0
25
92
0
84
17
7
45
29
1.77
8464--8503
21
2.0
20
95
5
71
35
10
22
32
1.87
23604--23638
16
2.2
16
100
0
70
34
34
14
17
1.90
36740--36775
2
18.0
2
100
0
72
50
0
0
50
1.00
43012--43082
3
23.0
3
82
5
88
39
0
0
60
0.97
48498--48529
15
2.1
15
94
0
55
25
18
9
46
1.79
55875--55928
6
9.3
6
88
11
78
83
0
16
0
0.65
55864--55926
22
3.0
22
80
13
80
79
0
20
0
0.73
55875--55928
11
4.7
12
86
13
78
83
0
16
0
0.65
55875--55928
16
3.1
17
89
7
74
83
0
16
0
0.65
57158--57797
83
7.6
83
92
2
1016
25
12
23
37
1.91
57158--57797
165
3.8
165
94
2
1057
25
12
23
37
1.91
57158--57797
248
2.5
248
92
3
1030
25
12
23
37
1.91
57636--57813
92
1.9
92
88
2
268
28
12
22
35
1.91
58515--58944
111
4.0
110
80
12
461
36
13
20
29
1.91
58516--58942
222
2.0
211
83
11
539
36
13
20
29
1.91
59282--59351
3
23.0
3
82
2
86
41
0
0
58
0.98

Tables:   1

The End!