Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008134.1 Hibiscus syriacus cultivar Beakdansim tig00110689_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61509

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1363--1388
7
3.7
7
100
0
52
0
11
0
88
0.52
3896--3925
2
15.0
2
100
0
60
50
0
0
50
1.00
9802--9843
16
2.8
15
79
10
50
61
0
4
33
1.17
11157--11221
16
4.1
16
85
0
85
10
12
30
46
1.76
13841--13982
25
5.8
25
95
2
252
32
14
19
33
1.92
14116--14173
3
19.7
3
83
16
77
67
0
0
32
0.91
14118--14165
23
2.0
24
92
4
80
66
0
0
33
0.92
14374--14751
87
4.3
87
90
3
524
25
19
28
26
1.98
14433--14658
41
5.3
41
70
14
177
25
19
29
25
1.98
27369--27402
15
2.2
16
89
5
52
76
5
0
17
0.98
28989--29181
25
7.8
25
97
0
352
32
13
20
33
1.92
29317--29380
3
22.0
3
84
12
89
67
0
1
31
1.00
32668--32707
20
2.0
20
85
0
53
30
12
15
42
1.83
35198--35245
23
2.1
23
84
0
60
41
14
16
27
1.87
43599--44114
84
6.1
84
76
6
395
17
29
10
42
1.82
43536--44065
252
2.1
251
89
1
801
16
30
11
42
1.82
45799--45875
38
2.0
39
89
5
120
35
10
10
44
1.73
48946--49007
28
2.2
28
97
2
117
27
30
24
17
1.97
50359--50397
19
2.2
18
86
9
53
51
0
0
48
1.00
50762--50824
22
2.9
23
72
11
69
28
9
15
46
1.78
52150--52184
18
1.9
18
88
0
52
25
31
20
22
1.98
61137--61203
31
2.2
31
88
0
98
55
22
4
17
1.60

Tables:   1

The End!