Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000814.1 Hibiscus syriacus cultivar Beakdansim tig00001574_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88277

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1345--1395
2
26.0
2
96
4
95
50
0
0
49
1.00
14716--14759
20
2.2
20
91
0
70
27
20
4
47
1.69
26751--26796
24
1.9
24
100
0
92
41
10
13
34
1.79
32694--32755
27
2.3
27
100
0
124
25
37
19
17
1.94
35319--35374
2
28.0
2
100
0
112
50
0
0
50
1.00
36075--36218
22
6.5
22
83
3
191
15
23
29
30
1.96
36073--36218
66
2.2
66
87
0
211
16
23
29
30
1.96
39845--39894
19
2.6
19
93
0
91
30
16
30
24
1.96
41300--41389
11
7.5
11
71
23
67
32
35
3
28
1.74
41303--41406
36
2.9
36
95
1
183
30
36
3
28
1.75
41977--42028
15
3.4
15
75
15
52
15
17
0
67
1.24
45775--45859
11
7.2
11
72
22
66
31
36
3
28
1.74
45772--45876
36
2.9
36
95
1
185
30
36
4
28
1.78
76415--76440
7
3.7
7
100
0
52
46
0
0
53
1.00
76941--76969
10
2.9
10
100
0
58
27
0
0
72
0.85
77815--77886
38
1.9
38
94
2
128
12
9
36
41
1.76
78531--78584
25
2.2
25
83
3
65
46
12
14
25
1.81
78946--78980
14
2.4
15
90
4
54
42
0
2
54
1.15
78994--79041
11
4.2
12
76
7
55
56
0
4
39
1.19
80395--80437
22
2.0
21
86
8
61
23
0
2
74
0.93
83422--83455
16
2.1
16
94
0
59
14
5
0
79
0.91
86566--86629
30
2.2
30
78
18
80
73
4
17
4
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86571--86629
29
2.1
28
84
9
75
72
3
18
5
1.17
86571--86629
28
2.1
28
87
9
84
72
3
18
5
1.17

Tables:   1

The End!