Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000815.1 Hibiscus syriacus cultivar Beakdansim tig00001575_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76826

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4406--4475
28
2.5
28
86
4
88
30
1
27
41
1.65
9160--9193
14
2.3
15
90
5
52
52
0
17
29
1.45
11760--11791
10
3.2
10
90
0
55
87
0
0
12
0.54
17517--17832
150
2.1
150
89
7
483
40
13
8
37
1.75
18185--18240
27
2.1
26
83
12
69
42
0
1
55
1.10
21670--21722
27
2.0
25
85
10
70
64
5
9
20
1.44
22675--22718
19
2.3
19
100
0
88
54
15
9
20
1.68
27783--27821
15
2.6
15
100
0
78
20
5
23
51
1.67
30277--30307
4
7.8
4
92
0
53
74
0
3
22
0.96
31965--32422
84
5.5
84
80
3
514
25
19
25
30
1.98
31966--32432
168
2.8
169
83
2
606
24
19
24
30
1.98
32756--33529
94
8.1
94
90
4
1149
21
17
26
34
1.96
33322--33557
106
2.2
106
90
0
373
24
16
25
33
1.95
40555--40619
2
32.5
2
100
0
130
50
0
0
49
1.00
43186--43257
2
36.0
2
100
0
144
50
0
0
50
1.00
43824--43882
25
2.4
25
97
0
109
22
11
15
50
1.76
43824--43896
25
2.9
25
87
0
65
26
10
13
49
1.75
44209--44284
27
2.8
26
78
8
80
64
2
2
30
1.21
44961--44988
2
14.0
2
100
0
56
50
0
0
50
1.00
47024--47299
107
2.6
107
92
1
455
35
21
10
32
1.87
47241--47360
61
2.0
61
86
0
168
40
17
7
34
1.78
48632--48686
23
2.4
24
90
6
87
49
0
1
49
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48629--48683
22
2.4
23
80
19
71
49
0
1
49
1.11
54778--55064
156
1.8
156
83
0
376
35
20
17
27
1.94
64451--64764
120
2.6
123
83
4
377
26
16
13
42
1.85
69667--69691
10
2.5
10
100
0
50
32
20
0
48
1.50
71088--71120
16
2.1
16
94
0
57
57
21
12
9
1.62
71545--71572
14
2.0
14
100
0
56
57
14
14
14
1.66
75402--75441
20
2.0
21
90
5
64
27
17
22
32
1.96
76039--76106
20
3.5
20
90
4
95
27
20
22
29
1.98
76139--76183
21
2.3
19
85
11
56
26
17
22
33
1.96

Tables:   1

The End!