Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000816.1 Hibiscus syriacus cultivar Beakdansim tig00001580_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58127

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4244--4407
64
2.5
64
83
10
185
32
21
15
29
1.95
4309--4452
64
2.2
64
84
6
175
29
23
18
28
1.98
6615--6683
30
2.3
30
87
5
95
40
14
10
34
1.80
16995--17076
23
3.8
21
77
16
80
21
32
21
23
1.98
18140--18169
15
2.0
15
100
0
60
40
0
26
33
1.57
19285--19352
18
3.9
18
69
23
65
39
7
4
48
1.51
19301--19366
32
2.1
32
100
0
132
39
9
6
45
1.61
22152--22204
27
2.0
25
82
13
63
54
3
5
35
1.42
22562--22601
21
1.9
21
84
0
53
47
22
2
27
1.64
38678--38713
16
2.2
16
100
0
72
50
5
13
30
1.65
38788--38812
12
2.1
12
100
0
50
76
16
0
8
1.02
45927--46258
137
2.4
137
85
5
427
32
13
12
40
1.82
48665--48761
2
48.5
2
100
0
194
49
0
0
50
1.00

Tables:   1

The End!