Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000818.1 Hibiscus syriacus cultivar Beakdansim tig00001584_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52268

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2284--2368
27
2.9
30
73
18
88
42
10
8
38
1.69
2453--2512
28
2.2
27
82
8
68
41
6
10
41
1.65
3953--4086
43
3.1
43
100
0
268
53
14
6
25
1.64
5378--5415
2
19.0
2
100
0
76
50
0
0
50
1.00
22713--22742
2
15.0
2
100
0
60
50
0
0
50
1.00
25355--25402
20
2.6
18
83
9
60
50
0
2
47
1.12
25362--25402
20
2.2
20
91
8
68
48
0
2
48
1.14
42447--42497
21
2.4
22
87
9
79
49
7
17
25
1.74
49648--49702
26
2.1
28
77
19
64
49
18
14
18
1.80
51038--51196
30
5.3
30
81
1
203
60
8
13
16
1.58
51011--51196
59
3.2
59
83
3
223
58
9
13
18
1.61

Tables:   1

The End!