Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000819.1 Hibiscus syriacus cultivar Beakdansim tig00001586_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70338

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4527--4566
18
2.2
19
86
4
55
42
12
12
32
1.80
15533--15705
60
2.9
60
87
1
249
22
13
22
41
1.89
20787--20852
18
3.7
18
78
10
73
45
10
12
31
1.76
20791--20863
17
4.2
18
80
5
60
47
10
9
31
1.71
24841--25072
60
3.9
60
90
0
340
24
15
21
38
1.92
30493--30524
17
1.9
17
93
6
57
6
12
6
75
1.19
30933--31431
111
4.5
111
83
3
594
27
15
25
31
1.95
43483--43509
2
13.5
2
100
0
54
51
48
0
0
1.00
43509--43538
2
15.0
2
100
0
60
50
0
0
50
1.00
43850--43888
2
20.0
2
94
5
71
51
0
0
48
1.00
44801--44835
17
2.2
16
90
10
54
5
11
5
77
1.12
46226--46283
29
2.0
29
86
0
80
8
29
1
60
1.36
49694--49729
18
2.0
18
94
0
63
38
25
11
25
1.88
54083--54152
35
2.0
35
100
0
140
34
25
17
22
1.96
58327--58565
2
122.0
2
64
19
67
48
4
3
43
1.38
58666--58719
19
2.9
18
86
8
56
40
0
33
25
1.56
58676--58719
20
2.2
20
92
4
72
40
0
36
22
1.54
58943--58995
24
2.2
25
86
3
72
52
3
3
39
1.37
59486--59542
22
2.5
22
78
21
64
42
1
0
56
1.10
59535--59651
2
58.0
2
91
5
191
49
1
0
47
1.17
59053--60102
526
2.0
527
88
3
1562
43
11
8
37
1.71
59676--59719
7
6.3
7
84
10
63
47
38
0
13
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60639--60694
22
2.4
25
85
11
82
39
3
1
55
1.28
60712--60758
25
1.9
24
95
4
85
51
4
0
44
1.21
60712--60749
2
19.0
2
84
10
51
50
2
0
47
1.15
60717--60766
25
2.0
25
88
4
73
54
4
2
40
1.31
60852--60889
7
5.4
7
87
0
58
44
34
0
21
1.52
61052--61098
22
2.1
23
96
4
87
51
4
0
44
1.21
61337--61386
16
3.1
16
100
0
100
36
14
30
20
1.91
62020--62070
22
2.3
23
82
6
68
27
17
3
50
1.63

Tables:   1

The End!