Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008210.1 Hibiscus syriacus cultivar Beakdansim tig00110832_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43486

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12496--12525
15
2.0
15
100
0
60
13
46
26
13
1.80
15432--15460
11
2.6
11
100
0
58
20
20
17
41
1.90
15432--15472
22
1.9
21
85
5
55
19
21
19
39
1.93
16226--16272
24
2.0
22
84
8
58
48
0
4
46
1.21
30266--30333
26
2.7
26
93
6
113
42
14
11
30
1.82
39730--39783
5
10.8
5
97
0
99
0
40
37
22
1.54
39781--39823
6
7.2
6
100
0
86
0
16
48
34
1.46
40496--40559
32
2.0
32
96
3
121
31
18
26
23
1.98
42704--42752
5
9.8
5
88
0
62
4
38
36
20
1.72
42750--42810
6
10.2
6
96
0
104
3
16
49
31
1.62

Tables:   1

The End!