Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008216.1 Hibiscus syriacus cultivar Beakdansim tig00110844_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  118781

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--129
35
3.5
38
86
12
180
49
10
20
20
1.77
37--131
17
5.6
16
69
21
68
49
9
18
22
1.76
5--129
40
3.5
35
90
6
180
48
10
20
20
1.78
476--530
19
3.3
16
79
20
60
43
0
0
56
0.99
476--520
19
2.3
20
88
11
76
44
0
0
55
0.99
470--538
16
4.2
15
74
20
50
43
0
1
55
1.08
959--994
18
1.9
19
88
5
56
66
22
11
0
1.22
12909--12966
29
2.0
28
83
3
71
32
10
3
53
1.52
17556--17686
36
3.6
36
87
0
190
27
13
14
44
1.83
18295--18327
14
2.4
14
90
10
50
21
3
12
63
1.41
25861--25965
18
5.8
18
94
0
174
19
20
33
26
1.96
25861--25965
54
1.9
54
96
0
192
19
20
33
26
1.96
27835--27878
18
2.4
18
100
0
88
36
0
54
9
1.32
30639--30696
19
2.8
22
82
10
77
29
32
15
22
1.95
38467--38526
25
2.4
25
91
0
102
11
1
21
65
1.34
38825--38892
28
2.5
26
90
9
118
35
0
36
27
1.58
39313--39386
22
3.7
19
78
16
69
27
31
18
22
1.98
39430--39484
21
2.6
21
97
0
101
30
23
23
21
1.99
41877--41947
35
2.0
35
94
0
124
26
14
22
36
1.92
41963--42056
18
5.2
18
92
1
143
21
21
30
26
1.98
44764--44808
20
2.2
20
85
11
65
44
33
8
13
1.75
58390--58678
146
2.0
146
100
0
578
33
11
17
37
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63500--63806
152
2.0
153
87
2
438
40
6
9
43
1.62
64789--64914
55
2.3
56
83
4
148
38
13
9
38
1.77
71297--71323
3
9.0
3
100
0
54
66
0
0
33
0.92
72182--72273
43
2.1
43
82
4
105
47
2
19
30
1.61
72874--72997
62
2.0
61
87
4
178
33
20
12
32
1.91
76982--77103
62
2.0
61
84
7
158
35
15
16
32
1.90
78541--78660
35
3.3
36
88
5
172
44
20
4
31
1.70
78592--78652
21
3.2
21
65
29
64
42
21
4
31
1.74
85676--85715
13
3.0
14
82
10
57
40
0
0
60
0.97
90819--90862
24
2.0
23
82
13
56
25
11
56
6
1.58
91014--91068
23
2.4
23
93
3
94
36
9
0
54
1.32
91292--91414
62
2.0
61
84
4
158
33
17
15
33
1.92
94926--94954
12
2.5
12
94
5
51
55
10
10
24
1.65
96369--96404
18
1.9
19
88
5
56
47
2
0
50
1.15
99539--99573
15
2.3
15
100
0
70
14
22
34
28
1.93
101058--101087
3
10.3
3
92
7
53
36
0
0
63
0.95
103064--103099
2
17.5
2
94
5
63
47
0
2
50
1.15
115508--115675
53
3.1
53
85
4
230
34
17
24
23
1.96
115652--115842
54
3.5
53
77
16
189
31
13
25
29
1.94
116141--116173
3
11.3
3
93
6
59
36
0
0
63
0.95
118074--118107
2
16.5
2
93
6
59
47
0
2
50
1.16

Tables:   1

The End!