Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008218.1 Hibiscus syriacus cultivar Beakdansim tig00110848_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63309

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
894--939
20
2.5
18
83
13
58
58
0
2
39
1.10
1753--1919
65
2.7
63
84
7
207
28
13
20
37
1.91
2753--2791
17
2.4
17
86
4
53
12
10
0
76
1.01
2823--2858
12
3.1
11
92
8
54
0
13
0
86
0.58
19184--19213
12
2.5
12
88
0
51
66
3
23
6
1.30
19374--19484
19
5.8
19
71
16
61
56
14
0
28
1.38
19386--19493
24
4.3
24
66
17
76
58
13
0
27
1.36
19386--19433
25
2.0
24
83
4
60
60
14
0
25
1.34
19310--19437
65
2.0
65
87
6
188
56
13
0
29
1.43
19413--19474
32
1.9
32
84
12
83
62
11
0
25
1.28
19361--19529
76
2.2
75
84
6
216
56
12
1
30
1.44
23612--23651
19
2.1
19
86
9
55
60
7
2
30
1.38
24750--24837
40
2.2
40
100
0
176
45
9
22
22
1.80
41322--41361
19
2.1
19
100
0
80
40
0
17
42
1.49
43758--43823
29
2.2
30
86
2
89
36
30
16
16
1.91
47801--47838
18
2.1
18
100
0
76
42
28
13
15
1.85
55784--55817
17
2.0
17
100
0
68
17
29
23
29
1.97
61044--61201
64
2.5
64
82
5
180
23
23
22
31
1.99

Tables:   1

The End!