Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000822.1 Hibiscus syriacus cultivar Beakdansim tig00001590_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57122

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3843--3919
39
2.0
39
86
0
109
36
23
23
16
1.94
7919--8028
57
1.9
57
92
0
184
32
16
28
22
1.96
20485--20596
56
2.0
56
100
0
224
37
17
16
28
1.91
30229--30352
6
20.3
6
91
3
194
47
15
2
34
1.58
33868--35717
6
310.7
6
96
3
3465
49
16
0
33
1.47
38230--38314
3
28.7
3
90
2
127
36
2
0
61
1.09
44440--44558
30
4.1
29
77
9
118
81
0
16
1
0.77
44440--44540
39
2.6
38
87
9
141
82
0
17
0
0.68
44441--44558
35
3.4
34
77
14
116
81
0
16
1
0.78
44440--44558
39
3.1
37
83
11
132
81
0
16
1
0.77
46064--46198
52
2.6
53
83
5
177
37
17
20
24
1.94
48295--48380
32
2.6
33
81
7
95
38
27
13
19
1.90
48423--48905
46
11.1
44
67
13
225
25
30
18
25
1.98
48430--48904
129
3.7
129
83
2
587
25
29
18
25
1.98
49267--49349
3
27.7
3
93
0
130
37
1
0
61
1.04
55167--55220
28
1.9
28
84
0
72
29
18
7
44
1.77

Tables:   1

The End!