Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008220.1 Hibiscus syriacus cultivar Beakdansim tig00110852_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64566

Tables:   1   

This is table  1  of  1  ( 50 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
824--878
14
4.3
14
78
19
66
10
14
23
50
1.74
825--898
24
3.1
24
86
7
98
13
12
20
54
1.71
831--897
23
2.9
22
88
6
80
13
11
19
55
1.69
1593--1647
16
3.4
16
89
0
92
10
12
20
56
1.66
3788--4241
134
3.4
134
87
2
635
27
16
26
29
1.97
6327--6365
14
2.6
16
84
12
55
20
7
5
66
1.36
6968--7002
3
12.0
3
87
6
54
71
0
0
28
0.86
16162--16285
17
7.2
17
70
17
62
59
0
0
39
1.03
16223--16287
17
3.7
17
76
13
69
70
0
1
27
0.96
19008--19063
11
5.5
11
75
16
57
62
0
35
1
1.06
19787--19876
21
4.2
21
63
19
51
48
11
2
37
1.51
19777--19915
65
2.2
61
85
11
174
48
8
2
40
1.49
27044--27129
21
4.0
21
75
11
77
22
37
25
15
1.93
32507--32568
23
2.7
23
74
16
56
32
1
4
61
1.27
32551--32592
11
3.8
11
84
12
59
28
2
0
69
1.01
32550--32592
16
2.6
17
75
20
54
30
2
0
67
1.03
32596--32635
20
2.0
20
85
0
53
47
7
2
42
1.45
33085--33113
15
1.9
15
100
0
58
34
0
10
55
1.34
33107--33138
16
2.0
16
93
0
55
37
0
15
46
1.46
33123--33266
24
6.1
25
79
12
126
44
3
6
45
1.47
33145--33191
21
2.2
22
88
3
69
40
2
6
51
1.39
33166--33192
14
1.9
14
100
0
54
44
3
7
44
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33069--33245
62
2.9
63
79
12
179
41
2
8
47
1.46
33177--33252
21
3.3
21
70
19
71
46
6
6
40
1.56
33180--33271
24
3.8
24
85
5
132
47
4
5
42
1.46
33322--33364
22
2.0
22
90
0
68
41
6
6
44
1.58
33302--33344
16
2.7
16
88
0
68
39
6
11
41
1.68
33707--33832
11
10.7
11
67
20
60
45
3
7
43
1.49
33686--33761
21
3.5
21
76
16
91
39
1
7
51
1.39
33766--33841
24
3.2
24
87
7
109
50
3
6
39
1.47
33766--33850
24
3.5
24
78
15
95
50
3
5
40
1.44
33885--33929
22
2.0
23
91
4
74
42
0
6
51
1.28
33953--33998
17
2.8
16
83
9
58
45
2
0
52
1.13
36344--36379
8
4.5
8
89
0
54
63
11
0
25
1.27
36440--36517
36
2.2
35
86
9
104
50
7
0
42
1.31
36620--36676
22
2.6
22
94
5
98
57
15
0
26
1.38
37357--37419
18
3.5
18
77
0
81
36
23
1
38
1.65
37707--37784
38
2.1
38
90
0
120
28
23
20
28
1.99
37711--37777
21
3.4
19
76
16
57
25
23
23
26
2.00
38103--38153
26
2.0
26
88
0
75
49
19
3
27
1.66
38102--38164
26
2.4
26
81
0
72
49
19
4
26
1.68
40704--40741
18
2.1
18
85
9
51
52
2
0
44
1.14
42406--42497
5
18.4
5
100
0
184
40
19
0
40
1.52
47377--47445
23
3.0
22
77
8
66
30
21
26
21
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48099--48131
2
16.5
2
100
0
66
51
0
0
48
1.00
54501--54568
23
3.0
23
77
0
73
30
22
26
20
1.98
55218--55249
2
16.0
2
100
0
64
50
0
0
50
1.00
61567--61634
23
3.0
23
77
0
73
30
22
26
20
1.98
62284--62333
2
26.5
2
77
18
54
44
2
0
54
1.11
62284--62333
11
4.6
11
81
18
61
44
2
0
54
1.11

Tables:   1

The End!