Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008231.1 Hibiscus syriacus cultivar Beakdansim tig00110868_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67858

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5311--5428
56
2.1
56
100
0
236
30
11
33
24
1.91
9915--10040
68
1.9
67
88
3
191
30
11
8
50
1.68
10067--10111
21
2.1
22
91
4
74
20
2
15
62
1.43
20203--20237
10
3.6
10
84
7
54
51
5
0
42
1.25
20175--20237
19
3.3
19
78
10
74
46
6
1
46
1.38
20203--20247
19
2.4
19
84
0
63
46
6
0
46
1.29
22014--22077
32
2.0
32
100
0
128
40
0
12
46
1.42
28299--28395
31
3.1
31
75
5
97
38
5
6
50
1.50
37497--37579
43
1.9
44
87
2
123
40
4
21
32
1.74
45792--45834
2
22.0
2
95
4
79
51
0
0
48
1.00
46095--46132
19
2.0
19
100
0
76
57
5
5
31
1.43
57099--57140
22
2.0
22
85
4
59
61
16
0
21
1.34
57106--57154
22
2.2
23
78
10
57
69
10
0
20
1.17

Tables:   1

The End!