Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008233.1 Hibiscus syriacus cultivar Beakdansim tig00110873_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42965

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3243--3348
31
3.4
31
77
13
101
30
18
17
33
1.95
3290--3379
31
2.9
31
83
6
103
28
18
22
30
1.97
6161--6201
3
13.7
3
90
10
66
36
0
0
63
0.95
9935--9975
8
5.2
8
88
2
57
12
19
9
58
1.61
9939--9975
16
2.3
16
100
0
74
13
18
10
56
1.66
12518--12663
7
21.4
7
76
15
94
78
0
21
0
0.75
12518--12663
14
11.2
13
80
14
151
78
0
21
0
0.75
12526--12663
25
5.4
25
88
7
190
78
0
21
0
0.74
13236--13408
90
1.9
91
84
5
235
30
23
17
28
1.97
13286--13409
45
2.8
42
72
12
115
29
22
16
32
1.95
23229--23311
21
3.9
21
78
7
87
21
36
25
16
1.94
30271--30318
22
2.3
22
89
10
75
35
14
10
39
1.80
31654--31703
26
1.9
26
95
0
91
28
22
18
32
1.97
31647--31770
45
2.8
42
74
12
124
27
22
18
31
1.97
40442--40502
31
2.0
31
96
0
113
40
6
8
44
1.60
40644--40702
31
1.9
31
89
0
91
40
5
10
44
1.60
41505--41566
18
3.2
20
78
19
62
61
0
1
37
1.06
41582--41630
14
3.8
14
69
20
52
57
0
0
42
0.99
41531--41668
64
2.2
59
74
22
134
55
2
0
41
1.17

Tables:   1

The End!