Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000824.1 Hibiscus syriacus cultivar Beakdansim tig00001592_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65895

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1727--1762
17
2.1
18
89
5
56
38
2
5
52
1.39
2450--2505
28
2.0
28
82
6
69
44
19
1
33
1.61
4175--4222
22
2.2
21
82
14
53
50
4
12
33
1.59
8104--8156
23
2.3
23
93
3
90
24
30
20
24
1.99
13377--13810
118
3.5
125
86
10
599
38
4
6
50
1.49
23012--23041
15
2.0
15
93
0
51
23
40
3
33
1.71
28314--29616
656
2.0
656
97
0
2489
36
13
17
32
1.88
34643--34680
2
19.0
2
100
0
76
50
0
0
50
1.00
38822--38951
11
12.2
10
66
20
50
53
6
2
36
1.40
38809--38879
11
6.2
12
72
19
53
57
4
1
36
1.27
38845--38963
18
7.2
16
69
23
70
54
5
1
37
1.35
42724--43051
169
1.9
168
96
3
615
45
14
8
32
1.75
45710--45739
14
2.1
15
93
6
53
66
0
0
33
0.92
46400--46448
24
2.0
24
92
0
80
12
30
32
24
1.92
47383--47411
14
2.1
14
100
0
58
34
13
24
27
1.93
48758--48827
21
3.3
21
64
15
54
22
34
17
25
1.96
48718--48832
42
2.7
42
87
0
167
23
35
16
24
1.95
48710--48856
42
3.5
42
79
2
143
25
33
18
23
1.97
48835--48881
21
2.2
22
88
3
69
29
29
23
17
1.97

Tables:   1

The End!