Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000825.1 Hibiscus syriacus cultivar Beakdansim tig00001596_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51544

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1222--1322
29
3.5
29
80
0
112
18
18
18
43
1.88
10556--10580
2
12.5
2
100
0
50
48
0
0
52
1.00
11344--11373
2
15.0
2
100
0
60
50
0
0
50
1.00
13169--13213
17
2.6
17
86
10
56
66
0
2
31
1.04
15397--15421
3
8.3
3
100
0
50
0
32
0
68
0.90
25922--25946
11
2.3
11
100
0
50
92
0
8
0
0.40
25902--25972
34
2.1
35
86
5
101
70
7
15
7
1.31
40718--40763
20
2.3
20
96
0
83
26
34
19
19
1.96
43112--43139
13
2.2
13
100
0
56
25
14
14
46
1.82
45002--45056
20
2.7
21
77
11
60
16
10
5
67
1.39
48953--48991
19
2.1
19
100
0
78
41
5
20
33
1.74
49931--49977
24
2.0
22
84
8
58
29
2
12
55
1.49

Tables:   1

The End!