Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008253.1 Hibiscus syriacus cultivar Beakdansim tig00110905_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59911

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
164--197
15
2.3
15
90
10
52
41
2
8
47
1.50
1265--1338
4
18.8
4
84
6
89
29
0
21
48
1.50
1269--1375
16
7.2
16
75
17
97
33
0
16
49
1.46
1282--1375
12
7.8
12
75
15
77
34
0
15
50
1.45
1296--1388
4
23.0
4
81
4
62
36
1
12
49
1.48
1567--1643
33
2.3
33
93
0
127
12
64
11
10
1.49
2594--2757
86
1.9
85
92
3
276
26
13
12
47
1.78
5871--5908
12
3.1
13
85
11
53
21
0
47
31
1.51
6134--6176
20
2.2
20
83
8
52
69
13
0
16
1.19
8691--8715
12
2.1
12
100
0
50
24
32
16
28
1.96
11075--11112
18
2.2
17
86
13
51
15
26
28
28
1.96
25853--25902
22
2.2
22
92
3
82
38
4
12
46
1.60
26050--26214
86
1.9
86
86
0
231
29
19
23
27
1.98
38565--38640
21
3.6
21
81
0
98
30
17
15
36
1.91
44257--44305
23
2.2
23
85
7
75
18
22
40
18
1.91
51442--51489
2
24.5
2
87
12
73
47
0
2
50
1.12
54659--54695
17
2.2
17
100
0
74
54
13
10
21
1.69

Tables:   1

The End!