Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000826.1 Hibiscus syriacus cultivar Beakdansim tig00001598_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46329

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1922--1966
22
2.0
22
91
0
72
35
2
11
51
1.50
2115--2318
61
3.3
61
82
4
223
29
14
25
30
1.95
4380--4445
4
16.8
4
73
17
50
71
1
3
24
1.09
4419--4480
17
3.7
18
74
21
55
70
3
3
22
1.16
13332--13492
4
40.2
4
100
0
322
50
24
0
24
1.50
17411--17505
30
3.1
30
82
7
86
32
16
7
43
1.76
17430--17505
31
2.5
30
85
6
91
30
18
9
42
1.81
22092--22159
35
1.9
35
87
0
100
47
16
0
36
1.47
25575--25873
37
8.6
37
79
14
332
43
2
8
45
1.46
25570--25873
106
2.9
108
88
7
420
44
2
8
44
1.47
26178--26339
65
2.5
64
84
3
200
31
22
16
29
1.96
31242--31299
24
2.4
24
97
2
107
36
12
17
34
1.87
37582--37609
6
4.7
6
100
0
56
14
0
0
85
0.59
42022--42070
16
3.1
16
88
8
57
46
0
14
38
1.44
42033--42070
16
2.3
16
95
4
67
47
0
15
36
1.46
44324--44358
16
2.2
16
95
5
63
28
22
14
34
1.93

Tables:   1

The End!