Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008264.1 Hibiscus syriacus cultivar Beakdansim tig00110918_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82187

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3575--3633
29
2.0
29
100
0
118
23
13
13
49
1.78
8083--8122
20
2.0
21
85
5
55
57
5
30
7
1.48
13333--13381
25
2.0
25
100
0
98
57
4
36
2
1.30
15611--15717
47
2.3
45
81
12
112
34
18
17
28
1.94
30469--30509
18
2.3
18
82
0
55
17
43
2
36
1.62
34205--34246
17
2.5
17
84
7
59
38
0
2
59
1.10
34591--35005
219
1.9
219
94
2
735
46
8
6
38
1.59
35772--35842
18
3.9
18
98
0
133
26
33
21
18
1.96
40613--40647
18
1.9
18
100
0
70
25
34
22
17
1.96
47580--47635
3
19.0
3
85
3
78
62
1
3
32
1.23
51855--51889
18
1.9
18
100
0
70
34
14
17
34
1.90
59178--59204
2
13.5
2
100
0
54
51
0
48
0
1.00
63156--63198
21
2.0
21
82
8
52
4
48
20
25
1.69
64264--64375
27
4.1
26
70
21
70
49
10
8
32
1.67
64261--64367
54
2.0
55
85
5
146
49
11
6
32
1.64
64298--64375
28
2.8
28
72
16
72
48
12
7
30
1.69
67061--67098
20
2.0
20
89
5
60
52
13
0
34
1.40
70934--70972
17
2.3
17
86
0
51
17
28
30
23
1.97
71804--72194
185
2.1
185
91
2
635
41
3
8
45
1.52
73517--73558
21
2.0
21
90
0
66
26
26
21
26
1.99
74104--74154
22
2.3
22
79
3
57
33
17
21
27
1.96
74492--74578
43
2.0
43
97
0
165
18
24
17
40
1.91

Tables:   1

The End!