Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008266.1 Hibiscus syriacus cultivar Beakdansim tig00110921_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58340

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2145--2195
20
2.6
20
90
3
77
35
15
5
43
1.71
3108--3174
13
5.4
13
73
10
59
28
1
41
28
1.65
3517--3566
19
2.6
19
90
0
82
44
6
14
36
1.69
16263--16306
23
2.0
22
83
16
56
72
6
18
2
1.17
21746--21777
15
2.1
16
94
5
57
25
18
15
40
1.90
22278--22353
37
2.1
37
100
0
152
39
13
22
25
1.90
24682--24715
13
2.8
12
86
8
50
2
11
2
82
0.89
24682--24715
6
5.5
6
89
6
50
2
11
2
82
0.89
24746--24793
11
4.1
11
81
10
51
2
10
4
83
0.87
25605--25647
20
2.2
20
95
4
79
48
4
11
34
1.60
28714--28755
16
2.5
17
76
7
50
66
2
11
19
1.34
28972--29024
20
2.7
19
79
5
52
7
9
3
79
1.05
32446--32481
17
2.1
17
89
0
54
36
19
5
38
1.75
33285--33336
21
2.6
21
87
6
72
30
15
7
46
1.74
37382--37433
21
2.6
21
87
6
72
30
15
7
46
1.74
38435--38503
13
5.5
13
71
10
63
28
2
39
28
1.71
41633--41701
13
5.5
13
71
10
54
27
2
42
27
1.70
52236--52340
49
2.3
46
84
12
128
33
1
13
51
1.52
53089--53168
10
7.5
10
72
18
54
82
7
10
0
0.84
53089--53168
19
3.8
19
71
23
61
82
7
10
0
0.84
57280--57322
22
1.9
23
90
4
70
13
11
4
69
1.33
57639--57690
11
4.8
11
95
4
97
92
7
0
0
0.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57639--57697
11
5.4
11
91
6
75
88
10
1
0
0.60
57640--57690
21
2.4
21
100
0
102
92
7
0
0
0.40
57639--57690
1
52.0
1
84
0
68
92
7
0
0
0.39

Tables:   1

The End!