Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008279.1 Hibiscus syriacus cultivar Beakdansim tig00110938_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62298

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1551--1890
131
2.6
129
81
3
394
42
15
8
32
1.78
1958--1991
17
2.1
16
88
5
50
76
17
0
5
0.98
4815--4892
23
3.4
22
75
5
66
32
21
19
26
1.97
4891--5116
103
2.2
103
93
1
382
36
23
13
26
1.92
10240--10300
23
2.7
23
89
0
86
32
26
19
21
1.97
10240--10308
23
3.0
23
86
0
84
31
26
20
21
1.98
10324--10541
103
2.1
103
93
0
364
36
22
13
27
1.91
11493--11549
21
2.7
21
94
0
96
28
21
22
28
1.99
18860--18892
15
2.2
15
94
0
57
36
33
15
15
1.88
19004--19072
24
2.8
26
83
12
85
31
24
5
37
1.79
19037--19072
12
3.0
12
91
0
63
36
25
5
33
1.79
19380--19600
64
3.5
63
83
4
239
27
18
19
33
1.96
20130--20159
3
9.7
3
92
7
51
66
0
33
0
0.92
43994--44067
31
2.4
31
86
2
96
41
13
17
27
1.87
44298--44331
16
2.1
17
88
5
52
41
0
5
52
1.25
50827--50866
14
2.9
14
96
0
71
60
7
15
17
1.57
50837--50885
24
2.0
24
88
0
71
57
14
14
14
1.66
50864--50892
14
2.1
14
100
0
58
48
27
17
6
1.72
50840--50891
24
2.2
24
82
0
59
53
19
15
11
1.71

Tables:   1

The End!