Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01008287.1 Hibiscus syriacus cultivar Beakdansim tig00110950_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 59462
ACGTcount: A:0.33, C:0.16, G:0.18, T:0.33
Found at i:7432 original size:3 final size:3
Alignment explanation
Indices: 7403--7489 Score: 102
Period size: 3 Copynumber: 28.0 Consensus size: 3
7393 GGCCTGTTTG
* * *
7403 TAA TAT TAA TAAA TAA TATA TAT TAA TAA TAA TAA TAA TAA TTA TAA
1 TAA TAA TAA T-AA TAA TA-A TAA TAA TAA TAA TAA TAA TAA TAA TAA
* *
7450 TAA TAA TAA TTA TATA TAA TAA TAC TAA TAA TAA TAA TAA
1 TAA TAA TAA TAA TA-A TAA TAA TAA TAA TAA TAA TAA TAA
7490 AATGAGTAAA
Statistics
Matches: 71, Mismatches: 10, Indels: 6
0.82 0.11 0.07
Matches are distributed among these distances:
3 62 0.87
4 9 0.13
ACGTcount: A:0.60, C:0.01, G:0.00, T:0.39
Consensus pattern (3 bp):
TAA
Found at i:8709 original size:21 final size:21
Alignment explanation
Indices: 8684--8736 Score: 97
Period size: 21 Copynumber: 2.5 Consensus size: 21
8674 TTTATCCGAT
8684 AGATGAAGCAAGATTTTATGA
1 AGATGAAGCAAGATTTTATGA
8705 AGATGAAGCAAGATTTTATGA
1 AGATGAAGCAAGATTTTATGA
*
8726 ATATGAAGCAA
1 AGATGAAGCAA
8737 TGAAATCGCA
Statistics
Matches: 31, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
21 31 1.00
ACGTcount: A:0.45, C:0.06, G:0.23, T:0.26
Consensus pattern (21 bp):
AGATGAAGCAAGATTTTATGA
Found at i:12045 original size:78 final size:78
Alignment explanation
Indices: 11885--12034 Score: 248
Period size: 78 Copynumber: 1.9 Consensus size: 78
11875 TGGTTTTGGA
*
11885 AGACTTTGCATGAAGCACTAGGAACTCGACTGAACTTTAGCATAATTTTTCATCCTCAGACTGAT
1 AGACTTTGCATGAAGCACTAGGAACTCGACTGAACTTTAGCACAATTTTTCATCCTCAGACTGAT
*
11950 GGACAGTCTAAGC
66 AGACAGTCTAAGC
* *
11963 AGACTTTGCATGAAGCGCTAGGAACTCGACTGAACTTTAGCACAATGTTTT-ATCCTTAGACTGA
1 AGACTTTGCATGAAGCACTAGGAACTCGACTGAACTTTAGCACAAT-TTTTCATCCTCAGACTGA
12027 TAGACAGT
65 TAGACAGT
12035 TTGAGTAGAC
Statistics
Matches: 67, Mismatches: 4, Indels: 2
0.92 0.05 0.03
Matches are distributed among these distances:
78 63 0.94
79 4 0.06
ACGTcount: A:0.31, C:0.21, G:0.20, T:0.29
Consensus pattern (78 bp):
AGACTTTGCATGAAGCACTAGGAACTCGACTGAACTTTAGCACAATTTTTCATCCTCAGACTGAT
AGACAGTCTAAGC
Found at i:16666 original size:2 final size:2
Alignment explanation
Indices: 16659--16705 Score: 94
Period size: 2 Copynumber: 23.5 Consensus size: 2
16649 TGTTTTATTA
16659 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
16701 AT AT A
1 AT AT A
16706 GGCATGATCC
Statistics
Matches: 45, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 45 1.00
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (2 bp):
AT
Found at i:19308 original size:22 final size:22
Alignment explanation
Indices: 19280--19358 Score: 115
Period size: 22 Copynumber: 3.6 Consensus size: 22
19270 TGTTTAAGCC
19280 TTCATAGGGGTATTGATACCCA
1 TTCATAGGGGTATTGATACCCA
*
19302 TTCATAGGGGTATCCG-TACCCA
1 TTCATAGGGGTAT-TGATACCCA
*
19324 TTCATAAGGGTATTGATACCCA
1 TTCATAGGGGTATTGATACCCA
*
19346 TTCATAGAGGTAT
1 TTCATAGGGGTAT
19359 CGGTACCTCT
Statistics
Matches: 50, Mismatches: 5, Indels: 4
0.85 0.08 0.07
Matches are distributed among these distances:
21 1 0.02
22 48 0.96
23 1 0.02
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.32
Consensus pattern (22 bp):
TTCATAGGGGTATTGATACCCA
Found at i:19328 original size:44 final size:44
Alignment explanation
Indices: 19280--19365 Score: 145
Period size: 44 Copynumber: 2.0 Consensus size: 44
19270 TGTTTAAGCC
* *
19280 TTCATAGGGGTATTGATACCCATTCATAGGGGTATCCGTACCCA
1 TTCATAAGGGTATTGATACCCATTCATAGAGGTATCCGTACCCA
*
19324 TTCATAAGGGTATTGATACCCATTCATAGAGGTATCGGTACC
1 TTCATAAGGGTATTGATACCCATTCATAGAGGTATCCGTACC
19366 TCTTAATATT
Statistics
Matches: 39, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
44 39 1.00
ACGTcount: A:0.27, C:0.21, G:0.22, T:0.30
Consensus pattern (44 bp):
TTCATAAGGGTATTGATACCCATTCATAGAGGTATCCGTACCCA
Found at i:19668 original size:30 final size:30
Alignment explanation
Indices: 19607--19668 Score: 70
Period size: 30 Copynumber: 2.1 Consensus size: 30
19597 TACTAAAGGA
* *
19607 TACCAATTGTTAAAAAAAATACCCAATTGT
1 TACCAATTGTTAAAAAAAATACCAAAATGT
* * **
19637 TACCAATTGTTGAAAAATATATGAAAATGT
1 TACCAATTGTTAAAAAAAATACCAAAATGT
19667 TA
1 TA
19669 AGCTCCCCCT
Statistics
Matches: 26, Mismatches: 6, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
30 26 1.00
ACGTcount: A:0.47, C:0.11, G:0.10, T:0.32
Consensus pattern (30 bp):
TACCAATTGTTAAAAAAAATACCAAAATGT
Found at i:20770 original size:48 final size:47
Alignment explanation
Indices: 20651--20776 Score: 136
Period size: 48 Copynumber: 2.7 Consensus size: 47
20641 CGGTGCACTA
*
20651 AGAGTGCATCGATGCAT-G-AAATGCATTCGATGTTTCAAAATAGTC
1 AGAGTGCATCGATGCATAGTAAATGCATTCGATGTTTCAAAATACTC
*
20696 AGAGTGCATCGATGCATAGCT-GATGCATTCGATGTTTTCATAAA-ACTC
1 AGAGTGCATCGATGCATAG-TAAATGCATTCGATG-TTTCA-AAATACTC
** * *
20744 TTAGTGCATTGATGCATAGTATATGCA-TCGATG
1 AGAGTGCATCGATGCATAGTAAATGCATTCGATG
20777 CCTGAAATGC
Statistics
Matches: 69, Mismatches: 6, Indels: 10
0.81 0.07 0.12
Matches are distributed among these distances:
45 17 0.25
46 1 0.01
47 19 0.28
48 29 0.42
49 3 0.04
ACGTcount: A:0.30, C:0.16, G:0.22, T:0.32
Consensus pattern (47 bp):
AGAGTGCATCGATGCATAGTAAATGCATTCGATGTTTCAAAATACTC
Found at i:23444 original size:22 final size:22
Alignment explanation
Indices: 23416--23491 Score: 152
Period size: 22 Copynumber: 3.5 Consensus size: 22
23406 CATGACCTTG
23416 TGCATCGATGCACATTCAAGGA
1 TGCATCGATGCACATTCAAGGA
23438 TGCATCGATGCACATTCAAGGA
1 TGCATCGATGCACATTCAAGGA
23460 TGCATCGATGCACATTCAAGGA
1 TGCATCGATGCACATTCAAGGA
23482 TGCATCGATG
1 TGCATCGATG
23492 AACTGTTAGG
Statistics
Matches: 54, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
22 54 1.00
ACGTcount: A:0.30, C:0.22, G:0.24, T:0.24
Consensus pattern (22 bp):
TGCATCGATGCACATTCAAGGA
Found at i:25419 original size:19 final size:19
Alignment explanation
Indices: 25395--25433 Score: 69
Period size: 19 Copynumber: 2.1 Consensus size: 19
25385 TCGAATGCAT
25395 TCCATGCACCGATGCACTC
1 TCCATGCACCGATGCACTC
*
25414 TCCATGCATCGATGCACTC
1 TCCATGCACCGATGCACTC
25433 T
1 T
25434 GAATATTTTC
Statistics
Matches: 19, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
19 19 1.00
ACGTcount: A:0.21, C:0.38, G:0.15, T:0.26
Consensus pattern (19 bp):
TCCATGCACCGATGCACTC
Found at i:25549 original size:64 final size:64
Alignment explanation
Indices: 25381--25560 Score: 202
Period size: 64 Copynumber: 2.8 Consensus size: 64
25371 GAATTAATTG
* * * * *
25381 AACATCGAATGCATTCCATGCACCGATGCACTCTCCATGCATCGATGCACTCTGAATATTTTCAA
1 AACATCGAATGCATTTCATGCATCGATGCACACTCCGTGCATCGATGCA-TCAGAATATTTTCAA
* ** * **
25446 AACATCGAATGTATTT-ATGCATCGATGCACAAGCCGTGCATCGATTCATCAGGCTATTTTTC-A
1 AACATCGAATGCATTTCATGCATCGATGCACACTCCGTGCATCGATGCATCAGAATA-TTTTCAA
** *
25509 AACATCGAATGCATTTCATGCATCGATGCACACTTGGTGCACCGATGCATCA
1 AACATCGAATGCATTTCATGCATCGATGCACACTCCGTGCATCGATGCATCA
25561 AGTGTTCCAA
Statistics
Matches: 95, Mismatches: 18, Indels: 5
0.81 0.15 0.04
Matches are distributed among these distances:
63 21 0.22
64 60 0.63
65 14 0.15
ACGTcount: A:0.29, C:0.26, G:0.17, T:0.28
Consensus pattern (64 bp):
AACATCGAATGCATTTCATGCATCGATGCACACTCCGTGCATCGATGCATCAGAATATTTTCAA
Found at i:31283 original size:20 final size:21
Alignment explanation
Indices: 31254--31309 Score: 62
Period size: 22 Copynumber: 2.7 Consensus size: 21
31244 TTTGTGCTTT
*
31254 ATGCACCGATGCAT-TT-AACA
1 ATGCATCGATGCATCTTGAA-A
*
31274 ATGCATCGATGCATCCTTGAAT
1 ATGCATCGATGCAT-CTTGAAA
31296 ATGCATCGATGCAT
1 ATGCATCGATGCAT
31310 AAGACCATGC
Statistics
Matches: 31, Mismatches: 2, Indels: 4
0.84 0.05 0.11
Matches are distributed among these distances:
20 13 0.42
22 16 0.52
23 2 0.06
ACGTcount: A:0.30, C:0.23, G:0.18, T:0.29
Consensus pattern (21 bp):
ATGCATCGATGCATCTTGAAA
Found at i:32881 original size:21 final size:21
Alignment explanation
Indices: 32839--32882 Score: 61
Period size: 21 Copynumber: 2.1 Consensus size: 21
32829 ACCCCGGGAG
*
32839 CTAGTTCTTCACGAGCTGCTC
1 CTAGTTCTTCACGAGCTCCTC
* *
32860 CTAGTTCTTCTCGTGCTCCTC
1 CTAGTTCTTCACGAGCTCCTC
32881 CT
1 CT
32883 CCTCCTTCAG
Statistics
Matches: 20, Mismatches: 3, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
21 20 1.00
ACGTcount: A:0.09, C:0.36, G:0.16, T:0.39
Consensus pattern (21 bp):
CTAGTTCTTCACGAGCTCCTC
Found at i:33927 original size:19 final size:19
Alignment explanation
Indices: 33891--33941 Score: 63
Period size: 19 Copynumber: 2.7 Consensus size: 19
33881 ATTAATTGAA
33891 CATCGAATGCA-T-TCCATG
1 CATCG-ATGCACTCTCCATG
33909 CA-CTGATGCACTCTCCATG
1 CATC-GATGCACTCTCCATG
33928 CATCGATGCACTCT
1 CATCGATGCACTCT
33942 GAATATTTTC
Statistics
Matches: 29, Mismatches: 0, Indels: 7
0.81 0.00 0.19
Matches are distributed among these distances:
17 6 0.21
18 4 0.14
19 18 0.62
20 1 0.03
ACGTcount: A:0.24, C:0.33, G:0.16, T:0.27
Consensus pattern (19 bp):
CATCGATGCACTCTCCATG
Found at i:34040 original size:64 final size:65
Alignment explanation
Indices: 33889--34049 Score: 202
Period size: 65 Copynumber: 2.5 Consensus size: 65
33879 GAATTAATTG
* *** *
33889 AACATCGAATGCATTCCATGCA-CTGATGCACTCTCCATGCATCGATGCACTCTGAATATTTTCA
1 AACATCGAATGCATTTCATGCATC-GATGCACAAGCCATGCATCGATGCACTCAGAATATTTTCA
33953 A
65 A
* * **
33954 AACATCGAATGCATTTGATGCATCGATGCACAAGCCATGCATCGATTCA-TCAGGTTATTTTTC-
1 AACATCGAATGCATTTCATGCATCGATGCACAAGCCATGCATCGATGCACTCAGAATA-TTTTCA
34017 A
65 A
34018 AACATCGAATGCATTTCATGCATCGATGCACA
1 AACATCGAATGCATTTCATGCATCGATGCACA
34050 CTTGGTGCAC
Statistics
Matches: 84, Mismatches: 10, Indels: 5
0.85 0.10 0.05
Matches are distributed among these distances:
64 37 0.44
65 46 0.55
66 1 0.01
ACGTcount: A:0.30, C:0.25, G:0.16, T:0.29
Consensus pattern (65 bp):
AACATCGAATGCATTTCATGCATCGATGCACAAGCCATGCATCGATGCACTCAGAATATTTTCAA
Found at i:35442 original size:61 final size:61
Alignment explanation
Indices: 35347--35472 Score: 234
Period size: 61 Copynumber: 2.1 Consensus size: 61
35337 CCAAGATTGT
*
35347 CTTTACTGTTGTTTAAAACAAAACATTTACATCCAAAAGGATGAAAATAGCTAATGTTAGG
1 CTTTACCGTTGTTTAAAACAAAACATTTACATCCAAAAGGATGAAAATAGCTAATGTTAGG
*
35408 CTTTACCGTTGTTTAAAACAAAACATTTACATCCAAAAGGATTAAAATAGCTAATGTTAGG
1 CTTTACCGTTGTTTAAAACAAAACATTTACATCCAAAAGGATGAAAATAGCTAATGTTAGG
35469 CTTT
1 CTTT
35473 TTATTTTTAA
Statistics
Matches: 63, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
61 63 1.00
ACGTcount: A:0.40, C:0.14, G:0.13, T:0.33
Consensus pattern (61 bp):
CTTTACCGTTGTTTAAAACAAAACATTTACATCCAAAAGGATGAAAATAGCTAATGTTAGG
Found at i:39028 original size:65 final size:65
Alignment explanation
Indices: 38892--39051 Score: 188
Period size: 65 Copynumber: 2.5 Consensus size: 65
38882 TGCACTAAGA
*
38892 GTGCATCGATGCATGAAATGCATTCGATG-TTTCAAAATAGCCAGAGTGCATCAATGCATGACTG
1 GTGCATCGATGCATGAAATACATTCGATGTTTTCAAAATAGCCAGAGTGCATCAATGCATGACTG
* * * *
38956 GTGCATCGATGCATCAAATACATTCGATGTTTTCATAAA-A-CTCTGAGTGCATCGATGTATAGT
1 GTGCATCGATGCATGAAATACATTCGATGTTTTCA-AAATAGC-CAGAGTGCATCAATGCAT-G-
39019 A-T-
62 ACTG
39021 GTGCATCGATGCATGAAATTA-ATTCGATGTT
1 GTGCATCGATGCATGAAA-TACATTCGATGTT
39052 CAATTTATTT
Statistics
Matches: 84, Mismatches: 6, Indels: 11
0.83 0.06 0.11
Matches are distributed among these distances:
64 28 0.33
65 48 0.57
66 7 0.08
67 1 0.01
ACGTcount: A:0.31, C:0.17, G:0.21, T:0.31
Consensus pattern (65 bp):
GTGCATCGATGCATGAAATACATTCGATGTTTTCAAAATAGCCAGAGTGCATCAATGCATGACTG
Found at i:39090 original size:65 final size:65
Alignment explanation
Indices: 38892--39099 Score: 182
Period size: 65 Copynumber: 3.2 Consensus size: 65
38882 TGCACTAAGA
** * * *
38892 GTGCATCGATGCATGAAATGCATTCGATGTTTCAAAATAGC-CA-GAGTGCATCAATGCATGACT
1 GTGCATCGATGCATGAAATTAATTCGATGTTTCAATATA-CTCATGAGTGCATCGATGCATGATT
38955 G
65 G
* * *
38956 GTGCATCGATGCATCAAA-TACATTCGATGTTTTC-ATAAAACTC-TGAGTGCATCGATGTAT-A
1 GTGCATCGATGCATGAAATTA-ATTCGATG-TTTCAAT-ATACTCATGAGTGCATCGATGCATGA
39017 GTAT-
63 -T-TG
* *
39021 GTGCATCGATGCATGAAATTAATTCGATG-TTCAATTTATTTCATG-GTGCATCGATGCATGGAT
1 GTGCATCGATGCATGAAATTAATTCGATGTTTCAATATA-CTCATGAGTGCATCGATGCAT-GAT
39084 TG
64 TG
*
39086 GTGCATCGGTGCAT
1 GTGCATCGATGCAT
39100 CACCTTGAAA
Statistics
Matches: 116, Mismatches: 14, Indels: 27
0.74 0.09 0.17
Matches are distributed among these distances:
63 4 0.03
64 46 0.40
65 62 0.53
66 4 0.03
ACGTcount: A:0.28, C:0.17, G:0.23, T:0.32
Consensus pattern (65 bp):
GTGCATCGATGCATGAAATTAATTCGATGTTTCAATATACTCATGAGTGCATCGATGCATGATTG
Found at i:40623 original size:13 final size:13
Alignment explanation
Indices: 40605--40636 Score: 57
Period size: 13 Copynumber: 2.5 Consensus size: 13
40595 TGGTCGCTCC
40605 ACTTCTTCTCCTT
1 ACTTCTTCTCCTT
40618 ACTTCTTCTCCTT
1 ACTTCTTCTCCTT
40631 -CTTCTT
1 ACTTCTT
40637 TGGAGAAGAG
Statistics
Matches: 19, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
12 6 0.32
13 13 0.68
ACGTcount: A:0.06, C:0.38, G:0.00, T:0.56
Consensus pattern (13 bp):
ACTTCTTCTCCTT
Found at i:41624 original size:13 final size:14
Alignment explanation
Indices: 41601--41630 Score: 53
Period size: 13 Copynumber: 2.2 Consensus size: 14
41591 TTCCCATTAC
41601 AGACGTGCATATGA
1 AGACGTGCATATGA
41615 AGAC-TGCATATGA
1 AGACGTGCATATGA
41628 AGA
1 AGA
41631 TTGTCCAACT
Statistics
Matches: 16, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
13 12 0.75
14 4 0.25
ACGTcount: A:0.40, C:0.13, G:0.27, T:0.20
Consensus pattern (14 bp):
AGACGTGCATATGA
Found at i:42180 original size:22 final size:22
Alignment explanation
Indices: 42035--42187 Score: 191
Period size: 22 Copynumber: 7.0 Consensus size: 22
42025 GATGTTTGAG
42035 CATTCATAGGGGTATCGGTACC
1 CATTCATAGGGGTATCGGTACC
*
42057 CATTC-TAGGGGTAACGGTACC
1 CATTCATAGGGGTATCGGTACC
* *
42078 CATTCATAAGGGTAACGGTACC
1 CATTCATAGGGGTATCGGTACC
* * *
42100 CATTCATAAGGGTATTGATACC
1 CATTCATAGGGGTATCGGTACC
**
42122 CATTCATAGGGGTATATGTACC
1 CATTCATAGGGGTATCGGTACC
* * *
42144 CATTCATAAGGGTATTGATACC
1 CATTCATAGGGGTATCGGTACC
*
42166 CATTCATAGGGGTATCAGTACC
1 CATTCATAGGGGTATCGGTACC
42188 TCTTAATATT
Statistics
Matches: 113, Mismatches: 17, Indels: 2
0.86 0.13 0.02
Matches are distributed among these distances:
21 20 0.18
22 93 0.82
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (22 bp):
CATTCATAGGGGTATCGGTACC
Found at i:42187 original size:44 final size:44
Alignment explanation
Indices: 42035--42187 Score: 211
Period size: 44 Copynumber: 3.5 Consensus size: 44
42025 GATGTTTGAG
* * ** *
42035 CATTCATAGGGGTATCGGTACCCATTC-TAGGGGTAACGGTACC
1 CATTCATAGGGGTATCAGTACCCATTCATAAGGGTATTGATACC
* * *
42078 CATTCATAAGGGTAACGGTACCCATTCATAAGGGTATTGATACC
1 CATTCATAGGGGTATCAGTACCCATTCATAAGGGTATTGATACC
42122 CATTCATAGGGGTAT-ATGTACCCATTCATAAGGGTATTGATACC
1 CATTCATAGGGGTATCA-GTACCCATTCATAAGGGTATTGATACC
42166 CATTCATAGGGGTATCAGTACC
1 CATTCATAGGGGTATCAGTACC
42188 TCTTAATATT
Statistics
Matches: 98, Mismatches: 9, Indels: 5
0.88 0.08 0.04
Matches are distributed among these distances:
43 25 0.26
44 72 0.73
45 1 0.01
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (44 bp):
CATTCATAGGGGTATCAGTACCCATTCATAAGGGTATTGATACC
Found at i:50188 original size:21 final size:21
Alignment explanation
Indices: 50163--50235 Score: 121
Period size: 21 Copynumber: 3.5 Consensus size: 21
50153 GTTATTCATT
50163 TGATGAATTACGTGAGGCTTA
1 TGATGAATTACGTGAGGCTTA
*
50184 TGATGAATTACATGAGGCTTA
1 TGATGAATTACGTGAGGCTTA
50205 TGATGAATTACAG-GAGGCTTA
1 TGATGAATTAC-GTGAGGCTTA
50226 TGATGAATTA
1 TGATGAATTA
50236 TCCTCAGAAT
Statistics
Matches: 49, Mismatches: 2, Indels: 2
0.92 0.04 0.04
Matches are distributed among these distances:
21 49 1.00
ACGTcount: A:0.33, C:0.08, G:0.26, T:0.33
Consensus pattern (21 bp):
TGATGAATTACGTGAGGCTTA
Done.