Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008326.1 Hibiscus syriacus cultivar Beakdansim tig00111030_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69586

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2887--2935
20
2.4
21
89
3
73
22
18
12
46
1.82
2887--2938
21
2.5
20
90
3
77
21
19
11
48
1.80
14850--14971
64
1.9
64
84
3
165
35
22
18
24
1.96
14873--15012
64
2.2
64
81
7
160
35
22
17
25
1.95
15656--15714
23
2.6
23
94
0
100
20
27
25
27
1.99
21833--21995
64
2.5
64
80
5
170
33
21
19
25
1.97
22646--22690
23
2.0
23
95
0
81
17
20
26
35
1.95
22647--22697
23
2.2
23
89
0
75
19
21
25
33
1.97
27652--27718
20
3.3
20
83
4
80
26
10
5
56
1.56
44653--44690
8
5.0
8
87
9
53
39
0
7
52
1.31
44539--44932
206
2.0
197
87
10
580
30
7
3
58
1.43
56481--57250
105
7.4
105
95
1
1270
32
25
18
23
1.97
58725--58762
8
5.0
8
87
9
53
39
0
7
52
1.31
58977--59038
20
3.2
20
75
25
69
22
6
0
70
1.09
58968--59037
22
3.4
22
71
18
69
22
5
0
71
1.07

Tables:   1

The End!