Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008346.1 Hibiscus syriacus cultivar Beakdansim tig00111074_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71456

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7761--7793
2
16.5
2
100
0
66
48
0
0
51
1.00
19648--20080
219
2.0
215
96
1
794
36
18
20
24
1.95
21696--21737
3
14.0
3
80
9
50
28
0
0
71
0.86
21698--21735
9
4.1
9
89
3
58
26
0
0
73
0.83
21821--21865
21
2.1
21
91
0
72
57
0
0
42
0.98
22565--22640
2
38.0
2
100
0
152
50
0
0
50
1.00
24040--24077
18
2.1
18
85
9
51
47
0
7
44
1.32
26653--26722
2
35.0
2
94
0
122
47
0
2
50
1.16
26781--26826
22
2.1
22
91
0
74
50
6
15
28
1.69
28346--28395
3
16.3
3
80
12
57
64
2
0
34
1.05
28646--28928
51
5.4
51
83
6
325
28
25
14
31
1.95
28646--29057
55
7.7
55
82
7
422
28
24
14
32
1.95
41614--41657
2
22.0
2
90
0
70
45
0
4
50
1.22
41714--41759
22
2.1
22
91
0
74
50
6
15
28
1.69
43280--43329
3
16.3
3
80
12
57
64
2
0
34
1.05
43539--43584
21
2.1
23
84
8
60
50
2
0
47
1.13
47753--47810
29
2.0
30
86
3
82
31
3
3
62
1.29

Tables:   1

The End!