Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008347.1 Hibiscus syriacus cultivar Beakdansim tig00111078_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63082

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2364--2542
53
3.4
53
88
0
268
22
25
20
30
1.98
2953--3061
41
2.6
42
84
7
125
28
22
21
27
1.99
2983--3063
42
2.0
41
90
2
126
27
22
22
28
1.99
3051--3075
13
1.9
13
100
0
50
24
20
24
32
1.98
3024--3238
93
2.3
92
95
0
385
27
21
19
31
1.97
3144--3168
13
1.9
13
100
0
50
24
20
24
32
1.98
19690--19761
11
6.3
11
77
15
74
18
4
1
76
1.02
19691--19828
6
22.3
6
72
20
63
22
4
1
71
1.11
19704--19770
23
2.9
24
80
14
77
14
5
1
77
1.03
19792--19906
48
2.4
44
74
24
106
30
6
3
60
1.38
19912--20129
14
15.4
14
70
15
96
13
5
3
77
1.09
20028--20125
38
2.6
38
74
15
96
16
3
5
75
1.11
20063--20097
12
2.8
13
86
8
54
20
2
0
77
0.90
20071--20123
20
2.6
20
85
8
63
15
1
3
79
0.96
25348--25417
33
2.1
33
81
0
77
18
12
18
50
1.78
26275--26303
2
15.0
2
92
7
51
51
0
0
48
1.00
30866--30924
29
2.0
29
81
15
68
40
6
10
42
1.65
34703--34865
80
2.0
80
95
3
290
32
16
11
39
1.84
38926--38965
20
2.0
20
90
0
62
47
10
5
37
1.59
38979--39018
20
2.0
21
90
5
64
45
15
5
35
1.68
39032--39070
20
2.0
20
90
10
62
41
15
5
38
1.69
38922--39071
53
2.9
52
94
3
257
48
12
6
33
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43638--43677
20
2.0
20
95
0
71
45
12
5
37
1.64
43634--43784
53
2.9
53
96
2
270
49
13
5
31
1.66
43691--43730
20
2.0
21
90
5
64
45
15
5
35
1.68
43745--43783
20
2.0
20
89
0
60
43
17
5
33
1.72
43938--44194
128
2.0
128
89
4
392
30
22
7
39
1.82
47099--47213
57
2.0
57
94
0
203
28
27
8
34
1.87
57734--57759
2
13.0
2
100
0
52
50
0
0
50
1.00
60855--60893
6
6.5
6
87
0
51
33
35
12
17
1.88
62836--62867
16
1.9
17
93
6
57
0
12
3
84
0.74

Tables:   1

The End!