Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008380.1 Hibiscus syriacus cultivar Beakdansim tig00111140_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24607

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2714--2801
31
2.9
28
76
14
86
77
6
14
1
1.03
2720--2814
44
2.1
45
81
9
115
74
7
16
1
1.09
5049--6039
105
9.5
105
87
2
1296
34
24
17
23
1.96
6588--6712
34
3.8
34
72
19
120
42
10
15
32
1.80
7068--7110
18
2.5
17
85
7
61
25
4
2
67
1.22
7146--7199
11
5.0
10
77
22
56
31
3
0
64
1.11
7343--7374
17
2.0
17
88
11
50
34
3
0
62
1.11
8279--8308
3
10.0
3
100
0
60
66
0
0
33
0.92
8581--8613
12
2.8
12
90
4
50
54
0
3
42
1.15
10303--10342
2
20.0
2
100
0
80
50
0
0
50
1.00
11441--11476
3
12.0
3
100
0
72
66
0
0
33
0.92
11753--11785
12
2.8
12
90
4
50
54
0
3
42
1.15
14823--14855
12
2.8
12
90
4
50
54
0
3
42
1.15
19594--19630
2
19.0
2
88
5
58
45
2
0
51
1.15
20679--20717
10
3.7
10
80
12
51
43
2
0
53
1.14
21016--21048
12
2.8
12
90
4
50
54
0
3
42
1.15
22738--22768
2
15.5
2
100
0
62
48
0
0
51
1.00
23801--23835
10
3.4
10
84
7
52
40
2
0
57
1.14
24116--24148
12
2.8
12
90
4
50
54
0
3
42
1.15
24404--24434
14
2.1
15
94
5
55
29
12
0
58
1.35

Tables:   1

The End!