Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008382.1 Hibiscus syriacus cultivar Beakdansim tig00111143_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67150

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
984--1018
17
2.1
16
94
5
61
28
0
14
57
1.38
2756--2789
2
17.0
2
100
0
68
50
0
0
50
1.00
6793--6846
28
1.9
29
82
14
69
48
1
1
48
1.23
8971--9012
16
2.6
16
100
0
84
16
19
7
57
1.62
19908--19989
30
2.7
30
100
0
164
17
7
17
58
1.60
20274--20347
29
2.5
30
91
2
114
29
41
1
27
1.64
20274--20358
29
2.9
29
86
6
109
28
43
1
27
1.62
23153--23203
16
3.2
16
83
8
59
17
13
0
68
1.21
23161--23202
15
2.7
15
88
3
57
19
11
0
69
1.19
23160--23202
23
1.9
22
85
4
59
18
11
0
69
1.17
29090--29125
18
2.1
17
90
10
56
41
0
19
38
1.52
29866--29897
15
2.1
15
94
0
55
53
15
25
6
1.65
38952--39012
21
3.0
20
80
4
68
24
32
26
16
1.96
44184--44209
13
2.0
13
100
0
52
38
7
0
53
1.30
44353--44383
10
3.1
10
95
0
53
16
9
41
32
1.80
46445--46482
12
3.2
12
89
10
53
55
0
0
44
0.99
63037--64794
48
37.1
48
67
13
631
24
45
6
23
1.76
63055--63141
27
3.4
27
66
18
78
24
49
6
19
1.72
63035--63158
24
5.2
24
60
7
63
21
52
6
19
1.68
63789--63996
114
1.9
110
90
6
337
23
43
7
25
1.79
63888--63973
44
2.0
42
81
6
100
20
43
8
27
1.80
63886--64372
141
3.5
141
89
7
763
24
44
6
24
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64246--64484
116
2.0
119
87
4
342
25
45
5
23
1.75
64365--64751
91
4.1
95
82
6
312
25
46
5
21
1.74
64428--64787
47
7.7
47
81
5
284
25
46
5
21
1.73
64106--64609
259
1.9
256
82
7
626
24
45
6
23
1.76
64413--64794
94
4.1
93
82
7
384
25
47
5
21
1.73
64430--64794
91
3.9
92
83
6
387
25
47
5
21
1.72

Tables:   1

The End!