Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008385.1 Hibiscus syriacus cultivar Beakdansim tig00111148_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58498

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13440--13477
4
9.5
4
100
0
76
26
0
26
47
1.52
14296--14409
59
1.9
59
87
3
167
33
23
4
38
1.75
23600--23655
27
2.1
27
100
0
112
28
25
21
25
1.99
29201--29255
13
4.3
12
82
13
65
83
0
12
3
0.77
29197--29255
26
2.3
26
85
8
77
81
0
15
3
0.82
29198--29262
19
3.2
20
77
14
71
80
0
15
4
0.88
30218--30708
271
1.8
270
90
2
797
34
18
22
24
1.96
30218--30708
136
3.6
135
91
1
779
34
18
22
24
1.96
32082--32133
2
26.0
2
100
0
104
50
0
0
50
1.00
37585--37629
24
2.0
22
86
8
63
35
2
2
60
1.22
54503--54567
13
5.1
13
73
19
57
60
1
20
18
1.45
54516--54579
20
3.3
20
74
12
80
59
3
21
15
1.50
54505--54592
37
2.4
37
100
0
176
60
2
20
17
1.47
54869--55256
29
13.2
30
91
4
625
23
20
24
31
1.98
54869--55256
205
1.9
205
93
4
676
23
20
24
31
1.98

Tables:   1

The End!