Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000839.1 Hibiscus syriacus cultivar Beakdansim tig00001621_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60998

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4849--4924
40
1.9
39
84
12
102
57
1
1
39
1.15
5389--5430
14
2.9
14
85
3
57
69
2
0
28
1.01
5720--5758
20
2.0
20
100
0
78
35
12
15
35
1.86
11608--11741
69
1.9
70
82
10
168
47
8
5
38
1.58
15752--15791
21
1.9
21
85
10
55
22
37
0
40
1.54
17975--18024
24
2.0
24
84
3
64
34
22
24
20
1.97
17958--18039
22
3.7
23
76
12
73
25
21
29
23
1.99
20583--20643
20
2.9
21
87
7
79
18
26
32
22
1.97
24596--24635
20
2.0
21
85
9
57
27
12
5
55
1.58
25982--26023
19
2.2
18
91
8
66
16
26
38
19
1.92
32090--32138
11
4.5
11
78
0
53
2
16
46
34
1.58
32813--32956
59
2.4
60
87
2
191
34
15
24
25
1.95
32991--33104
42
2.7
41
72
6
104
33
21
17
27
1.96
33159--33434
57
4.9
58
78
8
275
41
16
9
32
1.80
34645--34699
28
2.0
28
96
0
101
21
7
34
36
1.81
35327--35421
28
3.3
29
77
14
83
4
21
3
71
1.17
35332--35430
14
7.2
14
69
15
64
4
20
3
72
1.14
35880--35955
2
38.0
2
100
0
152
50
0
0
50
1.00
57036--57081
20
2.2
21
92
7
76
32
13
13
41
1.82

Tables:   1

The End!