Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008390.1 Hibiscus syriacus cultivar Beakdansim tig00111155_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61190

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1641--1684
20
2.2
20
84
4
63
65
0
15
18
1.27
8032--8065
17
2.1
16
88
5
50
76
0
8
14
1.01
8542--8588
24
2.0
24
83
8
60
57
12
2
27
1.47
12200--12225
13
2.0
13
100
0
52
15
23
46
15
1.83
22169--22211
20
2.3
19
80
11
52
27
25
4
41
1.75
22174--22211
20
1.9
20
88
0
58
28
23
5
42
1.76
24144--24176
3
11.0
3
93
0
57
69
0
0
30
0.88
27527--27555
15
1.9
15
100
0
58
72
0
0
27
0.85
27894--27935
14
2.9
15
82
6
52
64
4
11
19
1.44
32118--32169
22
2.4
22
93
0
86
25
51
9
13
1.71
38372--38411
21
1.9
21
89
0
62
25
40
25
10
1.86
43516--43541
3
8.7
3
100
0
52
34
65
0
0
0.93
46964--47044
29
2.8
29
84
0
108
28
18
11
41
1.84
50688--50727
20
2.1
19
85
4
53
27
2
10
60
1.42
53228--53269
18
2.3
18
87
0
57
30
16
4
47
1.67
55422--55455
3
11.3
3
100
0
68
32
0
0
67
0.91
55836--55931
42
2.3
43
94
3
169
59
5
5
30
1.41

Tables:   1

The End!