Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008401.1 Hibiscus syriacus cultivar Beakdansim tig00111170_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94450

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6804--6906
9
10.8
9
75
12
80
16
26
29
28
1.97
6804--6899
10
9.9
10
69
9
56
16
26
28
29
1.97
6804--6880
19
3.9
21
86
6
74
16
25
27
29
1.97
6825--6906
19
4.3
19
92
7
132
14
26
31
26
1.95
6909--6966
5
10.8
5
78
14
62
18
51
22
6
1.70
6909--6973
22
3.0
22
100
0
130
18
49
23
9
1.76
11303--11377
37
2.0
37
82
10
91
49
4
1
45
1.29
17019--17059
14
2.6
17
82
17
54
68
14
7
9
1.39
25327--26764
4
361.0
4
94
0
2402
46
24
3
25
1.68
40761--40792
2
16.0
2
100
0
64
50
0
0
50
1.00
43731--43762
2
16.0
2
100
0
64
50
0
0
50
1.00
59995--60057
29
2.1
31
82
8
76
69
1
3
25
1.12
61476--61518
21
2.0
22
86
4
61
39
13
6
39
1.72
68464--68503
21
1.9
21
89
0
62
35
5
30
30
1.79
72593--72617
13
1.9
13
100
0
50
40
32
20
8
1.81
86934--86991
27
2.1
28
93
3
100
22
5
24
48
1.71
88454--88549
4
24.0
4
95
0
174
27
0
23
48
1.51
89361--89410
2
26.0
2
76
8
50
52
0
0
48
1.00
89365--89421
17
3.1
17
70
18
51
50
0
0
49
1.00
92260--92301
12
3.5
13
90
6
54
28
0
23
47
1.52
92260--92288
6
4.8
6
100
0
58
31
0
17
51
1.45

Tables:   1

The End!